Pyrodictium abyssi: PABY_04970
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Entry
PABY_04970 CDS
T09712
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
pabi
Pyrodictium abyssi
Pathway
pabi00450
Selenocompound metabolism
pabi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pabi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PABY_04970
Enzymes [BR:
pabi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
PABY_04970
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
PABY_04970
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Gene cluster
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Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
BES80930
LinkDB
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Position
complement(462271..463521)
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AA seq
416 aa
AA seq
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MPGVGFLLDYESIRSDFPIFRERPGLVYLDNAATTQKPRRVIEAVEAFYRRSNANVARGL
YELAVEATRLYEEAHEKVAGFIGARGPGEVVFTRSASDSANMAAYMLLLSGVVRRGSKII
ATVMEHHSNLLPWRTVARLAGARLELAPVRPRDGRLDLDVLLSMVDDETAVVAVTHASNV
LGYVNPVREIAREARRHGALVVVDAAQSAPHMPLDVYSLGADMLFFSGHKMLGPTGIGVL
WVRGDRLEELEPPFQGGGIVKSVRLEGGELRVELAESPWRFEPGTPHIAGAVGLAAAVEY
LAEIGMERVEAHEKTLLGYALRRLGEVPGFQPVSTETAERLGIVAFNMEGHTPHAVALAL
GMEGVAVRAGFHCAEPLHRSLGLERGTVRASFYIYNGPEDIDRLAEALEKLARATG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtgccgggtgtaggcttcctactggactacgagagtatccgcagcgacttccccatattc
cgggagaggccgggcctagtctacctcgacaacgccgccactacgcagaagccccgccgt
gtcatagaggctgtggaggcgttctaccggcgtagtaacgctaacgtggcccgcgggctc
tacgagctggccgtggaggctactcggctctacgaggaggcccacgagaaggtggcgggc
ttcataggcgcccgtggccccggcgaggtagtgttcacgcggagcgccagcgactcggcc
aacatggccgcgtacatgctgctactgagcggcgtggtaaggagaggcagcaagataata
gcgacggtcatggagcaccacagtaacctgctgccctggaggaccgtggcccggctcgcg
ggggcccggctagagctagcccctgtgcgcccccgggacgggaggctagaccttgacgta
ttactcagcatggtcgacgacgagacagccgtggtggcagtcacgcatgctagcaacgtg
ctaggctacgttaaccctgtccgggagatagcccgggaggcgcgccgccacggcgcccta
gtggtggtcgacgccgcgcagagcgcgccccacatgccgctagacgtctacagcctcggg
gccgacatgctgttcttcagcggccacaagatgctggggcccaccggcataggagtgctc
tgggtaaggggtgaccgcctagaggagcttgagcctccgttccagggcggcggcatagtc
aagagcgtgcggctcgaagggggcgagctacgcgtcgagctcgccgagtcgccgtggagg
ttcgagcccggtacaccccatatagccggggccgtcggcctagcagccgcggtagagtac
ctagctgagataggcatggagcgcgtggaggctcacgagaagacgctcctagggtacgcg
ctccggaggctaggggaggtgccgggcttccagcccgtgagcaccgagacggcggagagg
ctgggcatagtagccttcaacatggagggacatacgccccacgccgtagccctggccctg
ggcatggagggcgtggctgtgcgcgctggcttccactgcgctgagccactgcaccgcagc
ctaggcctcgagaggggcaccgtgagggctagcttctacatctacaacgggcccgaggac
atagaccggctagcagaggccctagagaagctagccagggctacagggtaa
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