Pyrodictium abyssi: PABY_07980
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Entry
PABY_07980 CDS
T09712
Name
(GenBank) tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotran sferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
pabi
Pyrodictium abyssi
Brite
KEGG Orthology (KO) [BR:
pabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pabi03016
]
PABY_07980
Enzymes [BR:
pabi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
PABY_07980
Transfer RNA biogenesis [BR:
pabi03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
PABY_07980
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
FliG_N
Lipase_GDSL_2
DUF7342
TRAM
Motif
Other DBs
NCBI-ProteinID:
BES81231
LinkDB
All DBs
Position
complement(746543..747838)
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AA seq
431 aa
AA seq
DB search
MPRAYFETYGCALNHADTAIMKSVLASRGYEIVDSIDDADIIILNTCTVRMDTEERMKRR
IAELHRVARERSAILVVAGCMASAQPYTVKRIAPEAILVSTHNVHRVHEAIENGKNLLHE
PSRPKTLYTPDPAMMQRGRIAEIPVADGCVNDCSFCITKLARRRVYSRPMENIVRLVEAL
ARRGVVEIRITGQDVAVYGIDIYGKRMLPELLERLAEIKGDFMVRVGMMSPEQLEPVLDE
FIEALRKPRFFKFVHLPVQSGDDRVLRVMKRRYTVDQYREIVREIRRKIPGAMIATDIIV
GHPGEDEEAFMNTVRLVEELRFERVHLAQYTPRPRTVAAGLPQVPDPVKKRRSKQLMKVI
ERIGLEEHTRYVGTRAKALVVSQGERGGLDAKLYNYMPVVLPEGSATPGEWRCIEVTGAT
WYDLRGRVVEC
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgggcctacttcgagacctatggctgtgcattgaaccacgcggataccgctatc
atgaagagtgtgctggctagccgtggctacgagatagtggatagtatagatgatgccgat
attattatattgaatacttgtactgtgaggatggatacagaggagcgtatgaagagaaga
atagcggagctacaccgggtagcgagagagcgctcagcgatactagtagtggcgggctgt
atggcctccgcacagccctacaccgtgaagcgtatagcgccagaggcgatactagtctca
actcacaatgtccaccgcgtacacgaggctatcgaaaacggcaagaacctgctccacgag
ccttctaggcctaagaccctctacacccccgacccagctatgatgcagagggggaggata
gcagagatacccgtagccgacgggtgtgtaaacgactgcagcttctgcataaccaagcta
gcccggcgccgggtgtacagccgccccatggagaacattgtcaggctggtggaggcgcta
gcacgccgtggagtcgtggagataaggataacgggccaggatgtcgctgtctacgggatc
gacatctacgggaagaggatgctgcccgagctgctggaacgtctagcagagataaaggga
gacttcatggtgcgcgtggggatgatgagcccggagcagctagagccagtactagacgag
ttcatagaggccctccggaagccccgcttcttcaagttcgtccacctgcccgtgcagagc
ggcgacgaccgcgtactacgggttatgaagcgccgctacaccgtagaccagtaccgcgag
atagtccgggagataaggaggaagataccaggcgccatgatagctaccgacataatagtc
ggccatcccggcgaggacgaagaagccttcatgaacacggtgaggctcgtagaggagcta
cggttcgaacgagtccacttagcccagtacacgccgcgtccacgcacagtggctgccggg
ctgccccaggtaccggaccccgttaagaaacggcgctcaaaacagctcatgaaggtcata
gagcggatagggctcgaggagcacacgaggtacgtaggcacccgtgcaaaggccctagtc
gtgtcacagggggagcgcggcggcctcgacgctaagctctacaactacatgccggtagta
ctccccgagggctctgccacgccgggggagtggaggtgcattgaagtaaccggggccacc
tggtacgacctccggggacgcgttgttgagtgttag
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