Pyrodictium abyssi: PABY_09900
Help
Entry
PABY_09900 CDS
T09712
Symbol
rad50
Name
(GenBank) DNA double-strand break repair ATPase Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pabi
Pyrodictium abyssi
Brite
KEGG Orthology (KO) [BR:
pabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pabi03400
]
PABY_09900 (rad50)
DNA repair and recombination proteins [BR:
pabi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PABY_09900 (rad50)
Archaeal homologous recombinant proteins
PABY_09900 (rad50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
Rad50_zn_hook
AAA_21
AAA_15
SbcC_Walker_B
ABC_tran
AAA_29
AAA_27
Fib_alpha
BLOC1_2
Med9
Baculo_PEP_C
Prefoldin_2
GAS
FlaC_arch
DUF5927
DUF2730
AAA_16
COG3_N
DUF7540
DUF6011
EzrA
Motif
Other DBs
NCBI-ProteinID:
BES81423
LinkDB
All DBs
Position
complement(896380..899130)
Genome browser
AA seq
916 aa
AA seq
DB search
MIIERVELENVLSHRRTRVDFGRGIIAIVGPNGAGKTSIIDAITYAIFGSHSRGARSRKD
ALIRLGASIARISVEFTANGRRYRLQKVIQRNGATQAYLYQVGNGTTRLLARGVESVKAE
LRKILGIDPVLADLLLVTRQGEIDEILVDKERRIDVMNTILKLRAIEKAYERLASILRLL
RAKKSMLEEQYRTEEARLREAEESAREYRKVVEELERLKPLLEEAEKEYVQLRDRINELR
RLKQRFDFLNAKKEELERALRRLEQEYEEARREYEIALNANEELKELEKLEESLRLLEEA
LSLANEVSRDRQLLVSLRSRLERIEAELEALPEAEHAKEEYERLRAVVDELEHDSKRYLH
VKSQLEQLEARARLLRERANNRMRNLLDKLRAAVPLDFPREPGKIIEKMESMISSLDKAI
DATRVKLENIHGQVEAKRSEIRDLEEKLMKLTEAQGKCPLCGRPLSDEHRVELISRMRAQ
KKRLEAELKRLEAQEHMLRRELRDLESRKRLLERLARTVQGEAKSIELMLREADDAEKQK
QELQQQYLELFAKYKEHEEARQRLRELEVWVNRYQRLRALADEYKSLEAEVTRLEKEVAE
REKLLKDILSRAGLDLEGLEEVSKRISDYREYIASVRSEAARLPQAEAKLHKLEAEIDRV
RSELESIVSELEEIGDIGSALEHAEARLVELEDRLRELRSRVARLEGMREKLETMVSKTE
VLRSRVSRLREELQRYGDAIHALERIRRALGPEGIPRVLRQAVRNILEYHLRDTLMKFNI
DFLDVRLEDDYSVVLVTREGEKTVSMLSGGERIALAIAYRLALARVVGERIESMIMDEPT
IHLDEEKRRELVEIIKYGLEASGLLQLIVVTHDREIEDAADKVVEVVKVDGASVVNIRSP
GDDVAGAGTVRELVAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
ttgataatagagcgcgtagagctggaaaacgtgctgagccatcggagaacacgggtagac
tttggacggggcataatagctatagttggtccaaacggtgccggcaagaccagcattatc
gatgctataacctacgcgatatttgggtcacacagccgtggcgcccgcagccgcaaagac
gcattaataaggcttggagcctccatagcgcgcattagcgtagagttcacggctaacggg
cgtaggtaccgtctgcagaaggttatacagcgcaatggtgctacgcaagcatacctttac
caggtaggcaacggcactaccaggcttctcgcacgcggcgttgaaagtgtgaaagcagag
ctacggaagatactaggcatagacccggttctagccgatttactgctcgtgactaggcag
ggggagatagacgagatactagtggacaaggagagacgcatcgatgtaatgaatactatt
ctgaagctaagggcgatagagaaggcttacgagcgcttagcatcgatactccgtctgcta
cgcgcaaagaagagtatgcttgaggaacagtatcgtacagaggaagcacgtctacgtgaa
gccgaggagagcgctcgggagtaccgtaaggttgttgaggagcttgaaaggctgaagcct
ctactagaggaagctgagaaggagtatgtccagctaagggatcgtatcaacgagctgcgg
aggcttaagcagcgcttcgacttcctaaacgctaagaaggaggagctcgaacgggcacta
aggaggcttgagcaggagtacgaagaggctaggagagagtatgagatagcgctaaacgcc
aatgaagagctgaaggagcttgaaaagcttgaagagagtctacggctactagaggaggca
ttaagcctcgcaaacgaggttagccgcgatagacaactcttggtctcgctccggtccaga
ctagagagaatcgaagcagaactagaagctcttccggaagccgagcacgcaaaggaggag
tatgaacgactccgagccgtggtggacgagcttgaacacgatagtaagcgctaccttcat
gtaaagtctcaactagagcagttagaagccagagctaggcttctccgcgaaagagcaaac
aataggatgaggaaccttctagataagttgagggccgcagtgcctctagattttccccgg
gaacccggcaagatcatagagaagatggagtctatgatttcaagtctggataaggctata
gatgctacaagggtgaagcttgagaacattcatggacaagttgaggctaagcgctcggag
atacgtgacctggaagagaagcttatgaagctcacagaagcccagggtaagtgccctctg
tgtggtaggcctctaagcgacgagcaccgtgtagaactcatatccaggatgagggcgcag
aagaagcgcctcgaggccgagctgaagaggctagaagcccaggagcacatgctccgcaga
gaactgcgggacttagagtcgcggaagaggctgctagagaggcttgcaaggaccgtccag
ggagaggctaagagcatcgagctcatgcttagagaggccgatgacgccgaaaagcagaag
caggagctccagcagcagtaccttgagcttttcgctaagtacaaggagcatgaagaggct
aggcagaggctccgtgagcttgaggtatgggtgaacaggtaccagaggcttcgtgcgcta
gctgacgagtataagtctcttgaggccgaggtaaccaggcttgagaaggaggtagctgag
cgcgagaagctgcttaaggatatactcagtagggctggtctagaccttgaaggactcgag
gaggtctccaaaaggataagcgactaccgtgagtatattgctagcgttcgtagcgaggct
gccaggcttcctcaggctgaagctaagctacataaactagaggctgagatagacagggtg
cggagtgagctggagagcatagtgagcgagcttgaggagatcggcgacattggctctgca
ctagagcatgccgaggcaaggctagtagagcttgaggacaggctcagggagcttagaagc
cgggtggccaggctcgagggtatgcgggagaagctcgagacaatggtgtcgaagaccgag
gttctccgtagccgggtatccaggctaagagaggagcttcagcgctatggggatgcgata
cacgccctggagaggatacgccgcgcattgggccccgaaggtatcccgagggtcctccgg
caagctgtgaggaatatcctcgagtaccatctaagggatacgctgatgaagtttaatata
gactttctcgatgttaggcttgaggacgactatagcgtcgtcctggtgacgcgtgaaggc
gaaaagactgtatctatgctcagtggtggtgagcgtatagcacttgcaatagcatacagg
cttgccttggcccgtgtggtgggggagcgcatagagtctatgataatggatgagccgact
atacatcttgacgaggagaagaggcgtgaactggtagagattatcaagtatggtcttgaa
gctagtgggctactacagctaatagtggtaacgcatgacagggagatagaggacgccgcg
gacaaggttgtagaggtggtcaaagtcgatggagcaagcgtcgtgaatatacgctcccct
ggggatgatgtggctggtgcagggacggtgcgtgagctagttgcccactag
DBGET
integrated database retrieval system
