KEGG   Pyrodictium abyssi: PABY_10620
Entry
PABY_10620        CDS       T09712                                 
Name
(GenBank) transcription factor
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
pabi  Pyrodictium abyssi
Pathway
pabi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pabi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PABY_10620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pabi03021]
    PABY_10620
Transcription machinery [BR:pabi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     PABY_10620
 Prokaryotic type
  Archaeal type
    TFE
     PABY_10620
SSDB
Motif
Pfam: TFIIE_alpha GntR HTH_24 HTH_IclR MarR_2 TackOD1 HTH_36 Zn_Ribbon_TF Zn_ribbon_Com HTH_11 HTH_20 zf_C2H2_10 HTH_29 Zn_ribbon_RPB9 TrmB HypA Zn_ribbon_3 HTH_9
Other DBs
NCBI-ProteinID: BES81495
LinkDB
Position
complement(969629..970171)
AA seq 180 aa
MEMTSSSELEKLYTFIERLIDRDARIVLQALYEEGGELSEIDLAEKTGLKLNAIRRSLNL
LAEKGLAVYRRQKHPEKNRLIFYWRINYEGLPAIIEARKRATLERLQMLLEREESIHYYV
CPTDGTKYTFEEALDHEFACPRCGTMLVPDQDRELRIQIIRQYIALLEAEINSAKPRRSV
NT seq 543 nt   +upstreamnt  +downstreamnt
gtggaaatgaccagtagcagcgagctggagaagctctacacgttcatagagaggctgata
gaccgggacgcgcgcatagtgctccaggccctctacgaggagggtggcgaactctcggag
atagacctggccgagaagacggggctgaagctgaatgctatacggcgatctctcaacctc
cttgcggagaaggggctggccgtataccgtaggcagaagcatcctgagaagaacaggctt
atcttctactggaggataaactacgaggggcttccggctataatagaggcgcgtaaacgc
gctactcttgagaggctccagatgctgctggagcgcgaggagagcatacactactacgta
tgcccgaccgatggcacgaagtatacgtttgaggaggcgctagaccacgagtttgcgtgc
ccacgctgcgggacgatgctggtccccgatcaggatagagagctacgaatacagatcata
aggcagtacatagccctactggaggctgaaatcaacagtgccaagcctcgtagatctgtt
tag

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