Pyrodictium abyssi: PABY_14840
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Entry
PABY_14840 CDS
T09712
Symbol
rbcL
Name
(GenBank) type III ribulose-bisphosphate carboxylase
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
pabi
Pyrodictium abyssi
Pathway
pabi00630
Glyoxylate and dicarboxylate metabolism
pabi00710
Carbon fixation by Calvin cycle
pabi01100
Metabolic pathways
pabi01110
Biosynthesis of secondary metabolites
pabi01120
Microbial metabolism in diverse environments
pabi01200
Carbon metabolism
Module
pabi_M00968
Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
Brite
KEGG Orthology (KO) [BR:
pabi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PABY_14840 (rbcL)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
PABY_14840 (rbcL)
Enzymes [BR:
pabi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
PABY_14840 (rbcL)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
LigA
Motif
Other DBs
NCBI-ProteinID:
BES81917
LinkDB
All DBs
Position
1345292..1346617
Genome browser
AA seq
441 aa
AA seq
DB search
MPEKFDVIYHEFVDESYEPQETDLIAVFRVTPREGISIYDAAGRVAAESSVGTWTTLSVK
PSFFEKLKAKAYRMHDLGDGSWLVWVAYPLGLFEEGSIPNLASSVLGNIFGMKALDGLRV
EDIVFPREYIRWFPGPQHGIEGVRRILGVDKRPILATVPKPKLGYTPEEYGKVAYEILVG
GIDLVKDDENFAGQSFCRFEARLREVMKAIDRAEKETGERKGYLANVTATIKEMEKRIKL
VADYGNKFIMVDFLTAGWAALQHARELAEEYGLAIHGHRAFHAAFTRNPRHGVSMFVVAK
LGRLAGLDHLHIGTPGVGKMDAKTAEVLDNARVLREPVFKPREGDLFHLEQDWAGLKPVL
PVASGGLHPGNLQPVIEKLGTDVLLQVGGGVLGHPDGPRAGAAAVRQAIDAILEGVPLEE
YAREHRELARALEKWGRVHPV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgccagagaagtttgacgtaatataccacgagtttgtggatgagagctacgagccccag
gagaccgacctcatagcggtgttccgcgtcaccccgcgcgagggtatatccatatatgat
gcggctggccgcgttgcggccgagagcagcgtgggcacctggaccacgctcagcgttaag
cctagcttcttcgagaagctgaaggccaaggcctaccggatgcacgacctgggcgatggg
agctggcttgtctgggtagcgtatcccctcgggctcttcgaggagggtagcatccctaac
ctggctagtagcgtgctcggcaacatattcggcatgaaggcgctggacgggctacgcgta
gaggacatagtgttccctcgtgagtacatacgctggttccccgggccgcagcacggcatc
gagggcgtccgcaggatactaggcgtagataagcgccccatactcgccacagtgcccaag
cctaagctgggctatacacccgaagagtacgggaaggtcgcctacgagatactcgtcgga
ggcatagaccttgtcaaggacgacgagaactttgctgggcagagcttctgccgcttcgag
gccaggctccgagaggtcatgaaggcgatagacagggcggagaaggagacgggtgagagg
aagggctacctagccaacgtgaccgctaccataaaggagatggagaagaggatcaagctc
gtagcagactacgggaacaagttcataatggtggacttcctcacggctggctgggctgcg
ctccagcacgcacgcgagctcgccgaggagtacgggctcgctatccacgggcaccgggcg
ttccacgcagccttcacccgtaacccgcggcacggcgtctccatgttcgtggtggctaag
ctgggccggctggctgggctagaccatctccacataggcacacccggcgtgggcaagatg
gacgccaagacagcagaggtgctcgacaacgcgcgggtactccgcgagcccgtcttcaag
cccagggagggcgacctcttccacctggagcaggactgggccgggctcaagcccgtgctc
ccggtcgctagcggcggcttacaccccggcaacctacagcccgtcatagagaagctcggc
accgacgtgctgctacaggtcggcggcggcgtgctgggccatccggacggtccgcgggcc
ggcgcagccgccgtgaggcaggccatagacgcgatactggagggcgtaccccttgaggag
tacgcccgggagcaccgcgagctggccagagcgctcgaaaagtggggccgcgtgcacccc
gtctag
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