KEGG   Pyrodictium abyssi: PABY_16350
Entry
PABY_16350        CDS       T09712                                 
Name
(GenBank) replication factor C small subunit
  KO
K04801  replication factor C small subunit
Organism
pabi  Pyrodictium abyssi
Pathway
pabi03030  DNA replication
Brite
KEGG Orthology (KO) [BR:pabi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PABY_16350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pabi03032]
    PABY_16350
DNA replication proteins [BR:pabi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     PABY_16350
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid RuvB_N AAA_5 AAA_14 AAA_22 Rad17 AAA_3 AAA_lid_RFC1 nSTAND_NTPase5 AAA_18 nSTAND3 AAA_assoc_2 AAA_7 AAA_2 AAA_16 Mg_chelatase ResIII bpMoxR PhoH AAA_28 ATPase_2 FtsK_SpoIIIE DUF815 TniB AAA_33 DNAX_ATPase_lid KTI12 AAA_11 RNA_helicase AAA_30 UBA_Rad5 NPHP3_N DO-GTPase1 NB-ARC AAA_19 AAA_17 SRP54 IstB_IS21 SLFN-g3_helicase Sigma54_activ_2 Viral_helicase1 NACHT SRPRB AAA_25 Cdc6_lid Zeta_toxin TIP49 AAA_24 Torsin
Other DBs
NCBI-ProteinID: BES82068
UniProt: A0ABM8IWZ5
LinkDB
Position
1495205..1496191
AA seq 328 aa
MSSSIAELLWAEKYRPRSLDEIVNQEEIVRRLKKFVEEKNMPHLLFVGPPGTGKTTAAHA
LAHDLYGENYMQYMLELNASDERGIDTIRTKVKEFARSRTPPNIPFKIVLLDEADNMTAD
AQQALRRLMEMYTAFTRFILIANFPSKIIEPIQSRCAIFRFTPLKKEDVIARLKWICEQE
GCKYTEEGLETIYEVSEGDMRRAINILQAAAALGTVTPEIVYKVVGLAHPKEIREIIRLA
LDGEFLKARERLRTLMINYGLSGVDVIKQIHREIFGQELKIPEEIRVLIADYTGEIQFRL
VEGADDEIQLNAFLAWLTLLGQKLRGSS
NT seq 987 nt   +upstreamnt  +downstreamnt
ttgagttcgagtattgctgagctactctgggctgagaagtatcgcccaagatcgctcgat
gagattgttaaccaggaagagatagtaaggaggcttaagaagtttgtagaagagaagaat
atgccgcatctactattcgttgggcccccgggtactggaaagaccacagcagctcatgca
ctggcgcatgacctctatggcgagaactatatgcagtacatgctagagctaaatgccagt
gatgagcggggcatagacactataaggactaaggtaaaagagtttgcgcgtagcaggaca
ccaccaaacataccatttaagatagtgttgcttgacgaggcagacaacatgacagctgat
gcacagcaagcgttgcgtcggctaatggagatgtacaccgcgtttacccgcttcatacta
atagccaacttcccaagtaagataatcgagcccatccagtcacgctgtgcgatattcagg
ttcacgccgctaaagaaggaggacgtgatagctaggctcaaatggatatgcgagcaggag
ggctgcaagtatacggaggaaggccttgagacaatatacgaggttagcgagggcgacatg
aggcgcgcaataaacatactgcaggcggcagcggcgctcggcacggtgactccagagata
gtatataaggtcgtagggcttgcccatccgaaggagataagagagataattcggctagcg
cttgacggcgagttcctcaaggctagggagagacttaggacacttatgataaactacggg
ctaagcggtgttgacgttataaagcagatacatagagagatattcggccaagagctaaag
attccagaggaaataagagtcttaattgcagactacactggcgagatacagttcaggctg
gtagaaggtgctgacgacgagatacagcttaacgcattccttgcatggcttacactgcta
gggcagaagctgcgaggctcatcctag

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