Pyrodictium abyssi: PABY_16640
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Entry
PABY_16640 CDS
T09712
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
pabi
Pyrodictium abyssi
Pathway
pabi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pabi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PABY_16640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pabi03000
]
PABY_16640
03021 Transcription machinery [BR:
pabi03021
]
PABY_16640
Transcription factors [BR:
pabi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
PABY_16640
Transcription machinery [BR:
pabi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
PABY_16640
RNA polymerase III system
TFIIIB
PABY_16640
RNA polymerase I system
SL1/TIF-1B
PABY_16640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
RTT107_BRCT_5
RexA
Phage_int_SAM_6
Motif
Other DBs
NCBI-ProteinID:
BES82097
UniProt:
A0ABM8IX11
LinkDB
All DBs
Position
1526582..1527181
Genome browser
AA seq
199 aa
AA seq
DB search
MKSSATQQRQDDAALEPKPTANIENIVATVSLDQTLDLRMIERSILTVEYNPDQFPGLVY
RLDSPKVTALIFKSGKMVVTGAKSTHDLIEAVKKIVRNLKKHGIQIYGRPKVQIQNIVAS
ANLNVCVDLERAALTLENSMYEPEQFPGLIHRMDEPRVVLLIFSSGKMVITGAKREEEVY
EAVNRIYEKLKKLRAIRPC
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtcttctgccacacagcagaggcaggatgatgccgctctagaacccaagcctaca
gcgaatatagagaacatagtagctaccgtgtcgctcgatcagacgctcgacctccgtatg
atagagcggagtatactgactgtggagtacaatccggaccagtttcctggcctggtctac
aggctcgactcgccgaaggtcacggcactgatattcaagtcaggaaaaatggttgtaact
ggagctaagagcacccacgacctaattgaggccgtaaagaagatcgtgcgcaacttaaag
aagcatggtatacagatctatgggaggcctaaagtccagatccagaacatagtagcgtca
gctaacctaaacgtctgtgtagacctagagcgtgcggcactaacactagagaacagcatg
tacgagcctgagcagttccccggcctcatacaccgcatggatgagcctcgcgtagttctg
ctgatattcagctccgggaagatggtgataacgggggctaagcgtgaggaggaggtgtac
gaggccgttaacaggatatacgagaagctaaagaagctgagagcaataagaccctgctaa
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