Pyrodictium abyssi: PABY_16880
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Entry
PABY_16880 CDS
T09712
Name
(GenBank) DNA topoisomerase VI subunit B
KO
K03167
DNA topoisomerase VI subunit B [EC:
5.6.2.2
]
Organism
pabi
Pyrodictium abyssi
Brite
KEGG Orthology (KO) [BR:
pabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pabi03032
]
PABY_16880
Enzymes [BR:
pabi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PABY_16880
DNA replication proteins [BR:
pabi03032
]
Prokaryotic type
DNA Topoisomerases
PABY_16880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topo-VIb_trans
HATPase_c
HATPase_c_3
NFACT_N
Ribosomal_S13
HHH
Motif
Other DBs
NCBI-ProteinID:
BES82121
LinkDB
All DBs
Position
1551215..1552774
Genome browser
AA seq
519 aa
AA seq
DB search
MTPSQFFYEYREVAGFGSPSRALYQTVRELVENALDATDVHGILPDITLTIEQVPRHPTY
YRVTVEDNGIGIQPQHVPYAFGQVLYSSKYRLRQARGRFGLGAKMAILYGQIKTGEPVEV
YTSPIGSSRIYFFKIKIDIERNRPIVLARGEYPNPSGWHGTRVSVVIEGDWPRARHRIHE
YIRRTAIAAPYANITFIDPDGNITVYRRTIDKLPKQPREVKPHPQGVDIELLKQLIRKSR
ANTLLEFLIDAFQGVGRKTAEAFLEWAGFDKNLDPHKLDDRKLEKLARKLREYQRFRPPS
ADSLSPFGPEIIEAGLRTILKPEFVAAVTRRPRAYEGHSFIVEVGIAYGGQIPPSSEPIL
LRYANKIPLLYDEKSDVAWKVVDPKNFDWRNYLVVFPAPVAVLTHIASTKVPYKGVGKES
VADVPEIEQELRNALREAARKLREYLLQKKKEEEAKKRVITFMKYTPEIAKSLATILKDY
SVNEDYIREMLLTAMKKRLKIEDEKFAKLVEGLEVNIEE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgacgccatcgcagttcttctacgagtacagagaagtagctggattcggcagcccatca
cgagcgctatatcaaacagtacgtgaacttgttgaaaacgcgttagacgcgacagacgta
catggtatactcccagacataacactcacaattgaacaagttccaagacacccaacgtac
tacagagtaacggtcgaggataacggcatcggcatccagccacagcatgtcccatatgct
tttggccaagtactatatagctcaaagtacaggctaaggcaggcacgtggccgctttgga
ctaggtgctaagatggccatactctatggccagataaagactggcgagcctgtagaagtt
tacacatcgcctataggctcatcaagaatatacttcttcaagatcaagatagacatagag
aggaataggccaatagtgcttgccaggggcgaatatccaaaccctagtggctggcatggg
acacgtgtaagcgtggtaatagagggtgactggcctcgagccagacaccgaatacacgag
tacataaggaggacggcaatcgcagcgccatacgctaatataaccttcatagatcctgat
ggcaacataactgtgtaccgtcgcaccatagataagctgccgaaacagcctcgcgaggta
aaaccacacccacagggagtagacatagagttattgaaacaattgattagaaagtcaagg
gcaaatacactgttggagttcctcatagacgcgttccagggtgtaggacggaaaacagcc
gaagccttccttgaatgggcaggttttgacaagaatctagacccacacaagctagatgat
agaaagcttgaaaagctagctagaaagctaagagaatatcaacgcttccggccgccaagc
gctgactcgctctcgcccttcggcccagaaataatcgaggccggtctaaggaccatcttg
aaacctgagttcgtcgcagcagtaacccgccggccaagggcctatgagggtcattcattc
atagttgaagttggcatagcttatggaggacaaataccgccatccagtgaacccatactc
ttgaggtatgctaataaaattccgctactctacgacgagaaatctgatgtagcctggaaa
gttgttgaccccaagaacttcgattggcgaaactatctagtcgtcttcccagcgccagta
gcagtattaacacatatagcaagcacaaaggtgccttacaagggagtcggtaaggaaagt
gtagccgatgtacccgaaatagaacaggagctgcgaaacgcgcttagagaagcagctaga
aagttaagagaatacctgctgcagaagaagaaagaagaggaggccaagaaacgtgtcata
acattcatgaagtatactccagagatagccaaaagcctggcaactatactcaaagattat
agcgtcaacgaggactatataagagagatgttgctcactgcgatgaagaagaggttgaag
atagaggacgagaagtttgcaaaactagtagaggggctagaggttaacatagaagagtaa
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