Pyrodictium abyssi: PABY_17040 Help Entry PABY_17040        CDS       T09712                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism pabi  Pyrodictium abyssi Brite KEGG Orthology (KO) [BR:pabi00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:pabi03400]     PABY_17040 Enzymes [BR:pabi01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      PABY_17040     5.6.2.6  RNA 3'-5' helicase      PABY_17040 DNA repair and recombination proteins [BR:pabi03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     PABY_17040 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C WH_Lhr ResIII DEAD_assoc Cas3-like_C_2 UvrD-helicase AAA_19 AAA_25 PhoH nSTAND3 Peptidase_C37 Motif Other DBs NCBI-ProteinID:  BES82137 LinkDB All DBs Position 1565722..1568592 Genome browser AA seq 956 aa AA seqDB search MVGMSVKTAEVSSSLELLHEKVRELVRQRGWEKLTEIQEKAIKPIMEGHNVVIVAPTGYG KTEAALLPVLSMMLKEDIEPVTVLYITPLRALINDIYERINWWASQLGFIVARKHGDVPH SERARRLRKAPHILVTTPESLEIDLDWASKFRNFYRNLRWVIVDEVHEIISTKRGVQLAV LLERFRKLAGDFQLIMISATIGEPSLTGKTFVGSSKRPLSIITVEKRKELEIVVDYVDAP STEFWKRAAQKLLNHMEPLTLVFVNSKHVAERLHSEIEKMGIDGVVVHHASVFGEERRRI EKMAKEGKLKMIIATKTLELGIDIGSVKRVILFRPAGKVASLVQRLGRSGHSIGGKINGI IIATDELELLEAIAEARLAIKGRVEVPELPVKPLDMAARAIIGMALSGMYTVDDAYEILR NVYYFRGLSREEFDQLVKYLVENKMIKINEDGKISSGAQFYRIWRFDAGDSRFSWWVHNF SEFFTTMGEKKTYVVKTADGKTIGELDSDYVIRMLRIGHVIRLAGRNWQVINIDEHVNKV VVTESQGETTAVPFWKGQGPIASRLVLSELEQIIHEVHRGSLDLPEGLILSGDARKALSR LIEEIKKYRYPAPSRDSIIVERMPDELVFVTLAPEKVLRTLAYLVMLEAYRNSSDVYTRI SHYGFSLPVNALDFDPIEFLTSMDREEFMKRVWEAASRSPFFVEVAHNIQLVFGITRKLR KSDTLVYEEVIRQTLQEYFDPESAWALLEGLRKGRVKLKINHGRTSIYARIVAKEIPERP WISDVDELIAETLKGMAFTAEELVEALGLPLNLIEAKLRDMRKPSSQYRVFSFIDVDTGE QRWALVEDAAEIVRSEEFSSSFEPPVKDSLYMLLVKNETGSLIHAIVRLGDVIEKPDQVI KQIPFNEIYELKVVPLTGYYEGQPPKYQYVPRDIAPYLVLNAATLIQKIQMNNPIF NT seq 2871 nt NT seq  +upstreamnt  +downstreamnt ttggtaggcatgtcagttaaaacggcagaggtcagcagttccctagagctacttcacgag aaggtacgcgagctagtacgtcaaaggggctgggaaaagctcacagagatacaggaaaag gccataaaacccataatggaagggcacaacgtggtaatagtagcgcctacagggtacggc aagacggaggcagcgcttctgcctgtcctttcaatgatgctgaaagaggatattgagccg gtaacagtgctatacatcaccccgctgagggcgctcataaacgacatatacgagcggatt aactggtgggcttcgcagctcggctttatcgtcgccagaaagcatggggacgtgccgcac tccgagagagccaggcgactaagaaaggctccacacatactagtgacaactccagagagc ctcgaaatagaccttgactgggcgtctaagttccgcaacttctaccgtaacctgcgctgg gtaatcgtggacgaagtacacgaaataatatcgacgaagagaggggtacagctagcggtc ctcctagagcgtttccgcaaacttgccggagacttccagctaataatgatatccgctact attggcgagcccagcctaaccggtaaaacgtttgtaggtagctccaagcgccctctctcg ataattactgtcgagaagaggaaggaactagaaatagtagtcgactacgtcgatgctcca agtaccgagttctggaagcgcgctgcgcagaagctactaaaccatatggagccgctgaca ctcgtcttcgttaactcgaagcatgtagctgagaggcttcatagcgagatagagaaaatg ggtatagacggtgtagtagtacaccatgcctctgtctttggtgaagagcggcgccgtata gagaagatggccaaagaaggaaagctcaagatgataatagcgactaagacgctggagctg ggtatagacataggctcggtcaagcgcgtcatactgtttaggccggcagggaaagttgca tccctagtccagaggctgggtcgaagcggccacagtataggcggcaagataaacggtata atcatagctacagacgagctagagctgttagaggccatagcggaagcacgtctagcaata aagggccgtgtagaggttccggagcttcccgtaaagcctttggatatggctgccagggct atcataggaatggctctctcgggaatgtacactgtagacgacgcctacgagatactacgc aacgtatactacttccgtgggctttcgcgcgaagaattcgaccagctcgtcaaataccta gtggagaacaagatgataaagataaacgaagacggcaagatatccagtggcgcgcagttc tacagaatatggaggttcgatgcaggggacagcaggtttagctggtgggtacacaacttc tcagaattcttcacgactatgggcgagaagaagacatacgtagtgaagacagccgatggg aagactataggcgaactagactctgactacgtaatacggatgctccgtataggccacgta atcaggctggcgggcagaaactggcaagtgataaacatagacgagcatgttaacaaggta gtggtcactgagtcgcagggagagacaacggcagttccattctggaagggtcagggccca atagcgtcaagacttgttctgtcagagctcgagcagataatacacgaagtgcaccgtggc tcgttagacttgcccgaggggttgatactctctggggatgctcgcaaggcgctaagcagg ctcatagaggagataaagaagtacagatatccagcaccgagcagggacagtataatagtg gagaggatgccagacgagctagtattcgtcacgcttgcgccagagaaagtcctcaggacg ctagcgtacttggtgatgctcgaagcgtaccgtaatagctcagacgtctatacaaggata tctcactacggctttagcctcccagtaaacgcgctagacttcgaccctatagagttcctt acgagcatggacagagaggagttcatgaaaagggtatgggaggctgctagcaggtcacca ttcttcgtcgaagttgctcacaatatacagctcgtattcggcataactaggaaactacgt aagagcgacacactagtctacgaggaagttatcaggcagacgctgcaggagtacttcgat cccgagtcagcctgggcgctactagaggggcttcgtaagggacgtgtaaagctaaagata aaccatggccgtacgagcatctatgcaaggatagtggctaaagagataccagaaaggccc tggataagcgacgtagacgagctaatagccgagacgctcaagggtatggcgtttactgct gaagagctggtagaggctctagggctaccactaaacctcatagaggcaaagctacgcgat atgcgtaagccctcgtcacagtatagggtgttcagcttcatagacgtggataccggcgag cagcgatgggccctagtagaagacgcggcagaaatagtacgctctgaggagttctcttca tcgtttgagccgccggtgaaggacagtctctacatgctgctagtgaagaacgagacagga agcctaatacacgccatagtgaggctgggcgacgtaatagagaagccagaccaggtgata aagcagataccgtttaacgagatctacgagttaaaggtggtaccgctaactggctactat gaaggccagccacccaagtaccagtacgtgccgcgagacatagcgccgtatctagtactt aacgcagcaaccctaatacagaagatacaaatgaacaacccaatattctag

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