KEGG   Pyrodictium abyssi: PABY_20230
Entry
PABY_20230        CDS       T09712                                 
Name
(GenBank) ribosome assembly factor SBDS
  KO
K14574  ribosome maturation protein SDO1
Organism
pabi  Pyrodictium abyssi
Pathway
pabi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pabi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PABY_20230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pabi03009]
    PABY_20230
Ribosome biogenesis [BR:pabi03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    PABY_20230
SSDB
Motif
Pfam: SBDS_domain_II SBDS_N SBDS_C EFG_C WHD_BREX_BrxC
Other DBs
NCBI-ProteinID: BES82456
UniProt: A0ABM8IY35
LinkDB
Position
complement(1835930..1836643)
AA seq 237 aa
MPRRSKGEHEPVVARLEVGGKRFEVLVNPDLAFDYKQGRDVNLEDLVISDAVYTDLRRGL
RASPELLRRVFGTDDVVKIVAEIVRRGELQLTAEQRRKLIEAKRRQLINYIARNAIDPKT
KLPIPPARIEAAMEQAGVGVDPFKSVEEQAPQIIRAISRIIPIKLAKALLRIVVPAEYSG
RVAGALSKLGEVKHMDWRSDGSLVAELEIPAGLQQEVMDKLNKLTRGNVDVKVVSVV
NT seq 714 nt   +upstreamnt  +downstreamnt
atgccgcgccgaagcaagggcgagcacgagcccgtggttgcgaggctagaggtagggggc
aagaggttcgaagtactcgtaaaccctgaccttgcttttgactataagcagggcagggat
gtgaacctggaggatctcgtcattagcgacgctgtatacactgaccttcggcgggggctc
cgcgcctcccccgagcttctccgccgggtattcggcacagacgacgtagtcaagattgtc
gctgagatagtgaggcgtggagagctgcagcttactgctgagcagcgtagaaagctcatc
gaggctaagcgtaggcagcttataaactacatagctcgtaacgcgattgatccgaagact
aagcttcctataccacctgcaaggatagaagctgctatggagcaagctggtgtcggtgta
gacccgtttaagagtgttgaagagcaggcgccgcagataatacgtgcaatcagccgcata
atccccataaagttggcgaaagcgctgctccgtattgtagtacctgcagagtattccggg
cgggtggctggcgcgctctccaagcttggggaggtaaaacatatggactggcgtagcgat
ggcagcctcgtggctgagctagagataccggctggcctacagcaagaagtcatggataag
ctcaataagcttacccggggcaatgttgacgttaaagtcgtgagcgtggtgtaa

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