Pyrodictium abyssi: PABY_21680
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Entry
PABY_21680 CDS
T09712
Name
(GenBank) transcription initiation factor IIB family protein
KO
K03124
transcription initiation factor TFIIB
Organism
pabi
Pyrodictium abyssi
Pathway
pabi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pabi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PABY_21680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pabi03021
]
PABY_21680
Transcription machinery [BR:
pabi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
PABY_21680
Prokaryotic type
Archaeal type
TFB
PABY_21680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
HTH_Tnp_ISL3
Zn_ribbon_RRN7
Cyclin_C
Zn_ribbon_Nudix
Zn_ribbon_3
Zn_Ribbon_1
HTH_37
Zn_ribbon_PriA
RUBY_RBDX
Auto_anti-p27
CsoSCA_N
DZR
DUF7573
Cas12f1-like_TNB
Zn_Ribbon_YjdM
DUF7351
Zn_ribbon_IS1595
HTH_50
A2L_zn_ribbon
Zn_ribbon_TFIIB
zf_Rg
Zn_ribbon_RPB9
Trm112p
Motif
Other DBs
NCBI-ProteinID:
BES82601
LinkDB
All DBs
Position
complement(1964765..1965646)
Genome browser
AA seq
293 aa
AA seq
DB search
MIMSDKCPNCGSPLRLYARRQSDGRLVCTSCGYVIEESPIDSGPEWRSFTEEDRTRRSRV
GAPLTERVHDKGLTTYIYAPRNDIRARKLIAIQASLRSHGHKKLIKVLQEANRVATRLQL
PSRVAETMARIVRQLQSLGMIKKNNVNEYLAAAAVVAARIERHPLTMRDAADILGLNEQD
VWRAYRRIVTRLKVRVATPPKPQMYVSRIASKLGLSGEVEALATRFTVLLARTGLAQGKP
PEALAAAAVYVSSILLDQKRNQLTVAKAIGVTDATIRNRYRDIVDNFYIEVRL
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgattatgtctgacaagtgcccgaactgtggctcacctctacgtctgtatgcacgtagg
cagagcgacggtaggctggtatgtacatcgtgcggctatgttattgaggagtcgcctata
gactctgggcccgagtggcgcagctttaccgaggaggatagaacaaggaggagccgtgta
ggcgcgccgcttacggagcgtgtacacgacaagggtcttacgacgtacatctatgctcct
aggaacgatatacgtgcacggaagctcattgctatacaagcgagcctgcggagccacggc
cacaagaagctcatcaaggtgctccaggaagccaaccgtgtagcgacaagactgcagctg
ccgtcacgcgtagcagagacgatggcccgtatcgttagacagctacaatccctcggcatg
ataaagaagaataacgtgaacgagtatctcgcggctgctgctgtagttgctgcacgtatc
gaaaggcacccccttactatgcgtgatgccgccgatatacttggcctcaacgagcaagac
gtatggagagcttaccgccgtatagtgaccaggctaaaggttcgtgttgctacgccacct
aagccgcagatgtacgtgtctagaatagcatctaagcttgggctgagcggtgaagttgag
gcactggctacaaggtttactgtactgcttgcaaggacaggacttgcgcaggggaagcca
ccagaggccctggcggctgccgctgtgtacgtgtcttctatactgcttgaccagaagaga
aaccagctaacggtggctaaggctataggtgtaaccgatgctaccatacgcaaccggtac
cgcgacatagtcgacaacttctatatcgaggtacgactctaa
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integrated database retrieval system
