KEGG   Pyrodictium abyssi: PABY_23510
Entry
PABY_23510        CDS       T09712                                 
Symbol
fen
Name
(GenBank) flap endonuclease-1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
pabi  Pyrodictium abyssi
Pathway
pabi03030  DNA replication
pabi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pabi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PABY_23510 (fen)
   03410 Base excision repair
    PABY_23510 (fen)
   03450 Non-homologous end-joining
    PABY_23510 (fen)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pabi03032]
    PABY_23510 (fen)
   03400 DNA repair and recombination proteins [BR:pabi03400]
    PABY_23510 (fen)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pabi04147]
    PABY_23510 (fen)
DNA replication proteins [BR:pabi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PABY_23510 (fen)
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     PABY_23510 (fen)
DNA repair and recombination proteins [BR:pabi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PABY_23510 (fen)
Exosome [BR:pabi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   PABY_23510 (fen)
SSDB
Motif
Pfam: XPG_I XPG_N 5_3_exonuc HHH_5
Other DBs
NCBI-ProteinID: BES82784
UniProt: A0ABM8J0G6
LinkDB
Position
complement(2137589..2138641)
AA seq 350 aa
MGVNLREIIPPEAVAEIDLAALRYKVVAIDAYNALYQFLTAIRQPDGTPLMDSRGRVTSH
LSGLFYRTINLAEHGIKVVYVFDGKPPEMKYMEIERRKQVKAEAVKKYEEAVKRGDQEAA
RRYAQMAARLTDEMVRDAKRLLDAMGIPYVQAPAEGEAQAAFMARRGDAWAAASQDYDSL
LFGSPRLVRNLAITGRRKLPRKNVYVEVKPELIELDKLLKLLGITREQLIALGILIGTDY
NPDGIKGIGPKTALKMVKAHRDPVKLLQGLPRHELQVDPLKIYEYFLNPPATSDYKLEWR
EPDEKKVYEILVEEHDFSPDRVKNALERLKKAYREHFRGRQMGLDAWLRR
NT seq 1053 nt   +upstreamnt  +downstreamnt
gtgggtgtcaatctccgcgaaatcataccgcccgaagcggtggccgagatagacctggcg
gctctacgatacaaggttgtagctatagatgcttacaacgcgctctaccagttccttacc
gctatacggcagcccgacggcaccccgttgatggactcgcggggccgggttactagccat
cttagcgggctcttctaccgcaccataaacctcgcagagcacgggataaaggtggtatac
gtctttgacggtaagcctcccgagatgaagtacatggagatagagcggaggaagcaggtg
aaagccgaggctgtcaagaagtacgaggaggccgtcaagaggggcgaccaggaggctgca
agacgctacgcccagatggctgcgaggctcaccgacgagatggtacgggatgctaagcgg
ctgctagacgctatgggtatcccctacgtccaggccccggccgagggcgaggcccaggca
gccttcatggcgcgccggggcgacgcgtgggcggctgcgagccaggactacgactcgctc
ctattcggctccccccggctagtgagaaacctagccatcactgggcggcgtaagctaccc
cggaagaacgtctacgtggaggtcaagcccgagctaatagagctcgataagctgctgaag
ctcctagggataaccagggagcagctgatagcccttggcatactcataggcacggattac
aaccccgacgggattaagggcataggcccgaagacagcgctcaagatggtcaaggcgcac
cgcgacccggttaaactgctccaggggctcccccggcacgagctccaggtggacccgctg
aagatctacgagtatttcctcaacccgccggctacgagcgactacaagctcgagtggagg
gagcccgacgagaagaaggtctacgagatactcgtagaggagcacgacttcagcccagac
cgcgtcaagaacgcgctggagaggctgaagaaagcgtacagggagcacttcaggggccgc
cagatggggcttgatgcgtggctacgccgctag

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