Pyrodictium abyssi: PABY_23510
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Entry
PABY_23510 CDS
T09712
Symbol
fen
Name
(GenBank) flap endonuclease-1
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
pabi
Pyrodictium abyssi
Pathway
pabi03030
DNA replication
pabi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pabi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PABY_23510 (fen)
03410 Base excision repair
PABY_23510 (fen)
03450 Non-homologous end-joining
PABY_23510 (fen)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pabi03032
]
PABY_23510 (fen)
03400 DNA repair and recombination proteins [BR:
pabi03400
]
PABY_23510 (fen)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pabi04147
]
PABY_23510 (fen)
DNA replication proteins [BR:
pabi03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
PABY_23510 (fen)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
PABY_23510 (fen)
DNA repair and recombination proteins [BR:
pabi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
PABY_23510 (fen)
Exosome [BR:
pabi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PABY_23510 (fen)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BES82784
UniProt:
A0ABM8J0G6
LinkDB
All DBs
Position
complement(2137589..2138641)
Genome browser
AA seq
350 aa
AA seq
DB search
MGVNLREIIPPEAVAEIDLAALRYKVVAIDAYNALYQFLTAIRQPDGTPLMDSRGRVTSH
LSGLFYRTINLAEHGIKVVYVFDGKPPEMKYMEIERRKQVKAEAVKKYEEAVKRGDQEAA
RRYAQMAARLTDEMVRDAKRLLDAMGIPYVQAPAEGEAQAAFMARRGDAWAAASQDYDSL
LFGSPRLVRNLAITGRRKLPRKNVYVEVKPELIELDKLLKLLGITREQLIALGILIGTDY
NPDGIKGIGPKTALKMVKAHRDPVKLLQGLPRHELQVDPLKIYEYFLNPPATSDYKLEWR
EPDEKKVYEILVEEHDFSPDRVKNALERLKKAYREHFRGRQMGLDAWLRR
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtgggtgtcaatctccgcgaaatcataccgcccgaagcggtggccgagatagacctggcg
gctctacgatacaaggttgtagctatagatgcttacaacgcgctctaccagttccttacc
gctatacggcagcccgacggcaccccgttgatggactcgcggggccgggttactagccat
cttagcgggctcttctaccgcaccataaacctcgcagagcacgggataaaggtggtatac
gtctttgacggtaagcctcccgagatgaagtacatggagatagagcggaggaagcaggtg
aaagccgaggctgtcaagaagtacgaggaggccgtcaagaggggcgaccaggaggctgca
agacgctacgcccagatggctgcgaggctcaccgacgagatggtacgggatgctaagcgg
ctgctagacgctatgggtatcccctacgtccaggccccggccgagggcgaggcccaggca
gccttcatggcgcgccggggcgacgcgtgggcggctgcgagccaggactacgactcgctc
ctattcggctccccccggctagtgagaaacctagccatcactgggcggcgtaagctaccc
cggaagaacgtctacgtggaggtcaagcccgagctaatagagctcgataagctgctgaag
ctcctagggataaccagggagcagctgatagcccttggcatactcataggcacggattac
aaccccgacgggattaagggcataggcccgaagacagcgctcaagatggtcaaggcgcac
cgcgacccggttaaactgctccaggggctcccccggcacgagctccaggtggacccgctg
aagatctacgagtatttcctcaacccgccggctacgagcgactacaagctcgagtggagg
gagcccgacgagaagaaggtctacgagatactcgtagaggagcacgacttcagcccagac
cgcgtcaagaacgcgctggagaggctgaagaaagcgtacagggagcacttcaggggccgc
cagatggggcttgatgcgtggctacgccgctag
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integrated database retrieval system