Pseudomonas abietaniphila: ABDX87_05250
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Entry
ABDX87_05250 CDS
T11725
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pabn Pseudomonas abietaniphila
Pathway
pabn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pabn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ABDX87_05250 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pabn01007
]
ABDX87_05250 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pabn03016
]
ABDX87_05250 (serS)
Enzymes [BR:
pabn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
ABDX87_05250 (serS)
Amino acid related enzymes [BR:
pabn01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
ABDX87_05250 (serS)
Transfer RNA biogenesis [BR:
pabn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
ABDX87_05250 (serS)
Prokaryotic type
ABDX87_05250 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF5788
SPC25_N
Filament
TerB_C
CEP135_N
FmiP_Thoc5
PCRF
BLOC1_2
FapA
Motif
Other DBs
NCBI-ProteinID:
XAW94464
LinkDB
All DBs
Position
complement(1188102..1189382)
Genome browser
AA seq
426 aa
AA seq
DB search
MLDSKLLRTQLQDVADRLASRGFTLDVARIEALENQRKTVQTRTEQLQAERNARSKSIGQ
AKQRGEDIAPLMADIDRMAEELSSGKKELDGIQSELDAMLLSMPNLPHESVPVGADEEEN
VEVRKWGTPASFDFEVKDHVALGEKFGWLDFETAAKLSGARFALLRGPIARLHRALAQFM
ITLHINEHGYEEAYTPYLVQAPALQGTGQLPKFEEDLFKIAREGEADLYLIPTAEVSLTN
IVSGEILDAKQLPLKFVAHTPCFRSEAGASGRDTRGMIRQHQFDKVEMVQIVEPEKSMEA
LESLTGNAERVLQLLELPYRVLALCTGDMGFSAVKTYDLEVWIPSQDKYREISSCSNCGD
FQARRMQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENYQQADGSIRVPEVLKPWMG
GIEVIG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgctcgactccaaactgttacgtacccaacttcaggacgtagcggatcgcctggcttcc
cgtggtttcacactggacgtggcccgtatcgaagcgctggaaaaccagcgcaagactgtg
cagacccgcacagagcagcttcaggcagagcgtaacgcccgttccaaatccattggccag
gccaagcaacgcggcgaagacatcgcgccgctgatggctgacatcgaccgcatggctgaa
gagctgagcagcggcaagaaagaactggacggtattcagtccgagctcgacgccatgctg
ctgagcatgcctaacctgccgcacgaatcggtgccggtcggtgctgacgaagaggaaaac
gtcgaagtgcgcaagtggggcactccggcgtcgttcgatttcgaggtcaaggaccacgtc
gcgctgggcgaaaaattcggctggctggacttcgaaaccgccgccaaattgtccggtgcc
cgtttcgcgctgttgcgtggcccgatcgcccgtctgcaccgcgcgctggcgcagttcatg
atcaccctgcacatcaacgagcacggttacgaagaggcctacacgccttatctggtccag
gcccctgcactgcaaggcacgggtcagttgccgaaattcgaggaagacctgttcaagatc
gcccgcgaaggcgaagccgatctgtacctgattccgaccgccgaagtgtccctgaccaac
attgtgtccggcgaaatcctcgacgctaaacagctgccgttgaagttcgtcgcacacaca
ccgtgcttccgcagcgaagcgggcgcatcgggtcgtgatacccgcggcatgatccgtcag
caccagttcgacaaggtcgagatggtgcagatcgtcgagccagaaaagtccatggaagcc
ctcgaaagcctgaccggcaacgccgagcgcgttctgcaattgctggagctgccttaccgc
gtgctggcgctgtgcaccggcgatatgggtttcagcgcggtgaagacgtacgacctggaa
gtgtggattccaagccaggacaagtaccgcgaaatctcctcgtgctccaactgcggtgat
ttccaggcgcgtcgcatgcaggctcgctggcgcaatccggaaaccggcaaacctgagctg
gttcacaccctcaacggttcgggtctggcggtcggtcgtaccctcgttgccgtgctggaa
aactaccagcaggccgatggttcgatccgcgtaccggaagtcctgaaaccgtggatgggt
ggcatcgaggtcatcggctaa
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