Pseudomonas abietaniphila: ABDX87_07930
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Entry
ABDX87_07930 CDS
T11725
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pabn Pseudomonas abietaniphila
Pathway
pabn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pabn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABDX87_07930 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pabn03400
]
ABDX87_07930 (ung)
Enzymes [BR:
pabn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ABDX87_07930 (ung)
DNA repair and recombination proteins [BR:
pabn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABDX87_07930 (ung)
Prokaryotic type
ABDX87_07930 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XAW94966
LinkDB
All DBs
Position
complement(1784403..1785098)
Genome browser
AA seq
231 aa
AA seq
DB search
MTDDDRIKLEASWKQALREEFEKPYMGELREFLRQEHAAGKEIYPPGPLIFNALNSTPLD
NVKVVILGQDPYHGPNQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDIPNHGYLQSWA
DQGVLMLNTTLTVERANAASHAGKGWQHFTDKIIETVSAHQPHLVFLLWGAHAQSKKKLI
DATKHLILTAVHPSPLSAYKGFLGCGHFGLANKYLQQNGLTPIEWRLPEQV
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgacgaccgcatcaaactcgaggccagctggaagcaggcgctgcgcgaagaa
ttcgaaaagccttacatgggcgagctgcgcgagttcctgcgccaggagcatgcggcgggc
aaggagatctatcctccgggaccgctgatcttcaatgccctgaattcaacgccgctggat
aacgtgaaagtggtgatcctcggtcaggacccgtatcacggcccgaaccaggcgcacggg
ctgtgcttctccgtgcaaccgggcgtaccggcgccgccgtcgctggtgaacatctacaaa
gagctcaagcgcgacctgaatatcgacatccccaaccatggctacttgcagtcctgggcg
gatcagggcgtgctgatgctcaacaccacgctgaccgtcgaacgcgccaatgccgcctca
cacgcgggcaagggctggcagcacttcaccgacaagatcatcgaaaccgtcagcgcgcat
cagccgcacctggtcttcctgctgtggggcgcccacgcacagagcaagaaaaagctcatt
gatgcgaccaagcacctgatcctcaccgccgtccatccgtcgccgttgtcggcgtacaaa
ggctttttaggctgcgggcatttcggactggccaacaagtatctgcagcagaacggactg
accccgattgagtggcgcttgcctgaacaggtttag
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