KEGG   Pseudomonas abietaniphila: ABDX87_10260
Entry
ABDX87_10260      CDS       T11725                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K07713  two-component system, NtrC family, response regulator HydG
Organism
pabn  Pseudomonas abietaniphila
Pathway
pabn02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pabn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ABDX87_10260
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pabn02022]
    ABDX87_10260
Two-component system [BR:pabn02022]
 NtrC family
  HydH-HydG (metal tolerance)
   ABDX87_10260
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 AAA_5 AAA_2 AAA_16 Mg_chelatase AAA HTH_11 HTH_23 HTH_AsnC-type AAA_22 AAA_7 HTH_8
Other DBs
NCBI-ProteinID: XAW95389
LinkDB
Position
2302656..2304095
AA seq 479 aa
MPHILIVEDETIIRSALRRLLERNQYQVSEAGSVQEAQERFSIPSFDLIVSDLRLPGAPG
TELIKLGQGKPVLIMTSYASLRSAVDSMKMGAVDYIAKPFDHDEMLQAVSRILRDRQTVQ
SLQAERVASGKASASDKPGADNSNGEIGIIGSCPPMQDLYSKIRKVAPTDSNVLVQGESG
TGKELVARALHNLSRRAKAPMISVNCAAIPETLIESELFGHEKGAFTGASAGRAGLVEAA
DGGTLFLDEIGELPLEAQARLLRVLQEGEIRRVGSVQSQKVDVRLIAATHRDLKSLAKVG
QFREDLYYRLHVIALKLPALRERGADVNEIANAFLARQSAKAGRNDLRFGPDAEQAIRHY
AWPGNVRELENAVERAVILCESPEISADLLGIDIELSDLDVEEFIGLAPQTGNSASSTAH
EPTEDLSLEDYFQHFVLEHQDHMTETELARKLGVSRKCLWERRQRLGIPRRKTGVASET
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgccgcacattttgatcgtcgaagacgaaaccattatccgctctgccttgcgtcgcctg
ctggaacgtaatcagtaccaagtcagtgaagccggatccgtgcaggaagctcaggaacgt
ttcagcatcccctcatttgatctgatcgtcagcgacctgcgcctgcctggcgcaccgggc
accgagctgatcaagcttggtcagggcaaaccggtgctgatcatgaccagctacgccagc
ctgcgctcggccgtggactcgatgaaaatgggcgcggtggattacatcgccaagcccttc
gaccacgacgaaatgctgcaggccgtctcgcgtattctgcgtgaccggcaaacggtgcaa
agccttcaggccgagcgcgtggccagtggcaaagcgtccgcttcggacaagccgggcgcc
gacaacagcaacggcgaaatcggcatcattggctcgtgcccgccgatgcaggacctgtac
agcaagatccgcaaagtcgcaccgaccgattccaacgtgctggttcagggtgagtccggg
accggcaaggaactggtggctcgcgccctgcacaacctgtcgcgccgcgccaaggccccg
atgatttcggtgaactgcgcggccattccggaaaccctgatcgaatccgaactgttcggc
cacgagaaaggcgcgttcaccggtgccagcgccggacgcgccggtctggtggaagcggct
gacggcggaacgctgttcctcgacgaaatcggcgaactgccacttgaggcgcaggcacgt
ttgctgcgcgtgctacaggaaggcgaaattcgtcgtgtcggctcggtgcaatcgcagaag
gtcgacgtacgcctcatcgctgcgacccaccgggacctcaagagcctggccaaggtcggg
caattccgtgaagacctttattaccgtctgcacgtcatcgccctgaaactaccggcactg
cgtgaacgtggcgccgacgtgaacgaaatcgccaacgcgtttctggcacgtcaaagtgcc
aaggccggacgcaacgacctgcgatttggccctgacgccgagcaggcgattcgtcactac
gcctggccgggtaacgtgcgagagctcgaaaacgcggtcgagcgcgctgtgatcctgtgc
gaaagcccggaaatttcggcggatctgctgggcatcgacatcgagctgagcgacctggac
gtcgaagagttcatcggtctggcaccacagaccggtaattccgccagctccacggctcat
gagcccaccgaagacctgtcactggaagactatttccagcacttcgtgcttgagcatcaa
gatcacatgaccgagaccgagctggcacgcaaactgggcgtgagccgtaagtgtctgtgg
gaacgccgtcagcgcctgggcatccctcgtcgcaagacgggcgtggccagcgaaacctga

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