Pseudomonas abietaniphila: ABDX87_14425
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Entry
ABDX87_14425 CDS
T11725
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pabn Pseudomonas abietaniphila
Pathway
pabn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pabn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABDX87_14425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pabn03400
]
ABDX87_14425
Enzymes [BR:
pabn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ABDX87_14425
DNA repair and recombination proteins [BR:
pabn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ABDX87_14425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
XAW96159
LinkDB
All DBs
Position
complement(3242721..3243500)
Genome browser
AA seq
259 aa
AA seq
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MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAYQLDGYFLYACDA
EVPAQGGVALYSRLQPKAVINGLGFETADRYGRYLQADFDKVSIATLLLPSGMNGDEDLN
QKFKLMDDFGKYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPERAWMDE
IVGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgttaatggtattcaggctgcagtcgagcgtggtttgctc
agttggctgcaagcccagaatgccgacgtcatctgtcttcaggatacccgcgcctccgcc
tttgaactggacgatccagcctaccaactggacggctacttcctgtatgcctgcgatgcc
gaagttcctgcccaaggtggtgtggcgctttactcgcggctgcagccaaaggcggtaatc
aacggtctgggctttgaaacggccgaccgttacgggcgatacctgcaggcggatttcgac
aaagtcagtattgcaaccttgctgctcccgtccggcatgaacggcgatgaggacttgaac
cagaagttcaagctcatggacgacttcggcaagtacctggacaagcaacgccgcaaacgt
cgcgagtacatttattgtggctcgctctacgttgcgcagcagaagctggacatcaaaaac
tggcgcgacagccagcaatctccgggcttcctggcgccagagcgcgcctggatggacgag
attgtcggcaacatgggttatgtcgatgccctgcgcgaagtcagccgcgaaggcgaccag
tacagctggtggccggataacgaacaggccgagatgctgaatctgggctggcggttcgac
tatcaattgctgaccccgggtctgcgccgtttcgtacgcagcgctcgcctgccacgccag
ccgcgcttctcgcagcacgcgccgctgattgtggactacgactggacgttgacgatctga
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