KEGG   Pseudomonas abietaniphila: ABDX87_15180
Entry
ABDX87_15180      CDS       T11725                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pabn  Pseudomonas abietaniphila
Pathway
pabn02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pabn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ABDX87_15180
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pabn02022]
    ABDX87_15180
Two-component system [BR:pabn02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   ABDX87_15180
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 AAA_5 HTH_50 AAA_2 FleQ Mg_chelatase HTH_8 AAA AAA_16 bpMoxR uS17m_C HTH_43
Other DBs
NCBI-ProteinID: XAW90923
LinkDB
Position
complement(3400562..3401941)
AA seq 459 aa
MTTDTAIDSRIQVVLIDDDPHLRQALSQTLDLAGLKILPLSDAKGLQARIERDWPGVIVS
DIRMPGIDGLELLNQLHAQDPELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDALLD
SVRRALALRRLVLDNRSLRLELSDRQQLSTRLVGLSAPIQRLRDQIGALAATKADVLILG
ETGAGKEVVARALHDLSNRRAGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKF
EFANGGTLFLDEIESMSMDVQVKLLRLLQERVVERLGGNQQIPLDIRVIAATKEDLRHAA
DQGRFRADLYYRLNVAPLRIPPLRERGEDALVLFQHFADAASLRHGLPRHELQPGHRAML
LRHAWPGNVRELQNAAERFALGLELELEGAAHANMPSSSGGLSEQVEAFERALIAAELTR
PHSSVRSLAEALGVPRKTLHDKLRKHGLNFSGGGSDDNE
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgaccacggacaccgccatcgacagccggattcaggtggtgctgatcgacgacgacccg
catctgcgtcaggcgctgagccagactctggatctggccggactgaaaattcttccattg
agcgacgccaaaggtctgcaggcacgcatcgagcgtgactggccgggcgtgatcgtcagc
gatatccgcatgccgggcatcgacgggcttgaactgctgaaccagttgcacgctcaagac
ccggagttgccggtgctgctgatcaccgggcacggcgatgtgccgctcgcggtgcaagcc
atgcgcgcgggcgcttacgatttccttgaaaagccgttcgccagcgatgcgttgctcgac
agtgtgcgacgcgccttggcgctgcgtcgtctggtgctggacaaccgaagcctgcgcctg
gagctcagtgatcgtcagcaattgagcacacggctggtcgggctctcagcgccgattcag
cgcctgcgcgatcagatcggcgcactcgcggcgaccaaagccgatgtgctgattctgggc
gaaaccggcgcgggcaaggaggtcgtcgcccgcgcgctgcatgatctgtccaatcggcgt
gcagggccgttcgtggccatcaatgccggcgcgctggctgagtcggtggtggaaagcgaa
ctgttcgggcacgaacccggggcgttcacgggcgcgcagaagcggcgcatcggcaagttc
gaattcgccaacggcggcacgctgtttctcgatgagatcgagagcatgagcatggacgtg
caggtgaaactgctgcgccttttgcaggagcgcgtggtcgagcgactgggcggcaaccag
cagattccgctggatatccgggtcatcgcggcgaccaaggaggatctgcgtcacgcggcc
gatcagggccgtttccgcgccgacttgtattaccggttgaacgttgcgccgctgcgcatt
cccccgctgcgcgagcgtggcgaggatgcgctggtgctgttccagcacttcgccgacgcc
gcgagcctgcgccatggcctgcctcgccatgagctgcaaccgggacatcgggccatgctg
ctgcgtcacgcatggccaggcaacgtgcgcgaacttcagaacgccgccgagcgtttcgcg
ctgggcctcgagctggagctggaaggtgccgcccacgcgaacatgccgtcgtcgagcggc
ggcctcagcgaacaggtcgaagccttcgaacgcgccttgatcgccgctgaactcacccgc
cctcacagttcggtacgcagcctcgctgaagcgctcggcgtgccccgcaaaaccctgcac
gacaagctgcgcaaacatggcctgaatttcagcggcggtggttccgatgacaacgaatga

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