Pseudomonas abietaniphila: ABDX87_18540
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Entry
ABDX87_18540 CDS
T11725
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
pabn Pseudomonas abietaniphila
Pathway
pabn00330
Arginine and proline metabolism
pabn00480
Glutathione metabolism
pabn01100
Metabolic pathways
pabn01110
Biosynthesis of secondary metabolites
pabn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pabn00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
ABDX87_18540
09106 Metabolism of other amino acids
00480 Glutathione metabolism
ABDX87_18540
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
ABDX87_18540
Enzymes [BR:
pabn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
ABDX87_18540
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
XAW91537
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All DBs
Position
4196544..4197707
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AA seq
387 aa
AA seq
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MSIQVEDYFEKSTFEKMKAFADKQETPFVLIDTAMISQAYDDLRAGFEFAKVYYAVKANP
AVEIIDLLKEKGSSFDIASIYELDKVMGRGVGPDRISYGNTIKKSKDIRYFYEKGVRLYA
TDSEADLRNIAKAAPGSKVYVRILTEGSTTADWPLSRKFGCQTDMAMDLLILARDLGLVP
YGISFHVGSQQRDISVWDAAIAKVKVIFERLKEEDGIELKLINMGGGFPANYITRTNSLE
TYAEEIIRFLKEDFGDDLPEIILEPGRSLIANAGILVSEVVLVARKSRTAVERWVYTDVG
KFSGLIETMDEAIKFPIWTEKKGEVEEVVIAGPTCDSADIMYENYKYGLPLNLAIGDRLY
WLSTGAYTTSYSAVEFNGFPPLKSFYI
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattcaggtcgaagactatttcgagaaaagcaccttcgaaaaaatgaaggcgttt
gccgacaagcaagaaaccccgttcgtgctcatcgacaccgcaatgatcagccaggcctat
gacgacctgcgcgccggtttcgaattcgccaaggtttactacgcggtcaaggccaacccg
gccgtcgaaatcatcgaccttctgaaagagaaaggttcgagcttcgacatcgcctcgatc
tacgagctggacaaggtgatgggccgtggcgttggcccggatcgcatcagctacggcaac
accatcaagaagtccaaggacattcgctacttctacgagaagggcgttcgcctgtacgcg
accgactccgaagccgacctgcgtaacatcgccaaggccgccccgggctcgaaagtctac
gtgcgtatcctcaccgaaggctcgacgacggctgactggcctttgtcgcgcaaattcggt
tgccagaccgacatggccatggacctgctgatcctggcccgtgacctgggtctggtgcct
tacggcatctcgttccacgtcggttcgcaacagcgcgatatcagcgtgtgggacgccgcg
attgccaaagtgaaggtgatctttgagcgtctgaaagaagaagacggcatcgaactcaag
ctgatcaacatgggtggcggcttcccggccaactacatcacccgtaccaacagcctggaa
acctacgctgaagaaatcatccgcttcctgaaagaagacttcggtgatgacctgccggaa
atcattctggagccgggccgttcgttgatcgccaacgccggtattctggtcagcgaagtg
gtgctggttgcgcgcaaatcgcgtactgcggtcgagcgttgggtgtacaccgacgtgggc
aagttctccggcctgatcgaaaccatggacgaagccatcaagttcccgatctggaccgag
aagaaaggcgaagttgaagaggtcgtgatcgccggtccaacctgcgacagcgccgacatc
atgtacgagaactacaagtacggcctgccgctgaacctggccatcggcgaccgcctgtac
tggctgtccaccggtgcgtacaccaccagctacagcgccgtagagttcaacggctttccg
ccgctgaagtccttctacatctaa
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