KEGG   Pseudomonas abietaniphila: ABDX87_24435
Entry
ABDX87_24435      CDS       T11725                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pabn  Pseudomonas abietaniphila
Pathway
pabn00010  Glycolysis / Gluconeogenesis
pabn00020  Citrate cycle (TCA cycle)
pabn00260  Glycine, serine and threonine metabolism
pabn00280  Valine, leucine and isoleucine degradation
pabn00310  Lysine degradation
pabn00380  Tryptophan metabolism
pabn00620  Pyruvate metabolism
pabn00630  Glyoxylate and dicarboxylate metabolism
pabn00640  Propanoate metabolism
pabn00670  One carbon pool by folate
pabn00785  Lipoic acid metabolism
pabn01100  Metabolic pathways
pabn01110  Biosynthesis of secondary metabolites
pabn01120  Microbial metabolism in diverse environments
pabn01200  Carbon metabolism
pabn01210  2-Oxocarboxylic acid metabolism
pabn01240  Biosynthesis of cofactors
Module
pabn_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pabn_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pabn_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pabn_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pabn00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    ABDX87_24435 (lpdA)
   00020 Citrate cycle (TCA cycle)
    ABDX87_24435 (lpdA)
   00620 Pyruvate metabolism
    ABDX87_24435 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    ABDX87_24435 (lpdA)
   00640 Propanoate metabolism
    ABDX87_24435 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    ABDX87_24435 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    ABDX87_24435 (lpdA)
   00310 Lysine degradation
    ABDX87_24435 (lpdA)
   00380 Tryptophan metabolism
    ABDX87_24435 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    ABDX87_24435 (lpdA)
   00670 One carbon pool by folate
    ABDX87_24435 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pabn04147]
    ABDX87_24435 (lpdA)
Enzymes [BR:pabn01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     ABDX87_24435 (lpdA)
Exosome [BR:pabn04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   ABDX87_24435 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 HI0933_like GIDA FAD_oxidored AlaDh_PNT_C NAD_binding_8 DAO 3HCDH_N FAD_binding_3 Thi4 2-Hacid_dh_C Lycopene_cycl Amino_oxidase Pro_N DUF3373
Other DBs
NCBI-ProteinID: XAW92624
LinkDB
Position
5566381..5567817
AA seq 478 aa
MSQKFDVVVIGAGPGGYVAAIKAAQLGLKTACIEKYQDKEGKLALGGTCLNVGCIPSKAL
LDSSWKFYEAKNQFGVHGISVGDVKIDVAAMIGRKAQIVKGLTGGVASLFKANGVTSLQG
HGKLLAGKKVELTKPDGTTEVIEADNIILASGSRPIDIPPAPVDQNVIVDSTGALEFPAV
PERLGVIGAGVIGLELGSVWARLGSKVTVLEALEKFLPAADEAVSKEAQKTFTKQGLDIK
LGARVTGSKVNGNEVVVNYTDKDGEQNITFDRLIVAVGRRPVTTDLLASDSGVDIDERGF
IFVNDQCETSVPGVYAIGDVVRGLMLAHKASEEGIMVVERIKGHKTQMNYDLIPSVIYTH
PEIAWVGKTEQTLKAEGVEVNVGSFPFAASGRAMAANDTGGFVKVIADAKTDRVLGVHVI
GPGAAELVQQGAIGMEFGTSAEDIGMMVFSHPTLSEALHEAALAVNGHAIHIQNKKKR
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgtcccagaaattcgacgtggtagtgattggcgcaggccctggcggttatgttgccgcc
atcaaggccgcgcaacttggtctcaagactgcctgcatcgagaagtatcaggataaagag
ggcaagctcgctctcggcggtacctgcctgaacgtaggctgcattccttccaaggcgctg
ctggacagctcgtggaaattctacgaagccaagaaccagttcggtgttcacggtatctcg
gttggcgacgtgaaaatcgacgtggccgcgatgattggccgcaaggcacagatcgtcaag
ggtctgaccggtggcgttgccagcctgttcaaggccaacggcgtcacttccctgcaaggc
catggcaagctgctggccggcaagaaagtcgagctgaccaagcctgacggcaccaccgaa
gtcattgaagccgacaacatcatcctggcttcgggttcgcgtccgatcgacattccaccg
gctccggtcgatcagaacgtcatcgttgactccaccggtgctctggaattcccggcagtg
cctgagcgtctgggcgtcatcggtgcgggcgttatcggcctggaactgggctccgtgtgg
gcacgtctgggttccaaggtcaccgttctggaagcgctggagaagttcctgcctgccgct
gacgaagccgtctccaaagaagcacagaagaccttcaccaagcagggtctggacatcaag
ctgggcgctcgcgtcactggctcgaaagtcaacggcaatgaagtggtcgtcaactacacc
gataaagacggtgagcagaacatcacgttcgaccgcctgatcgttgccgtaggccgccgt
ccggtgaccaccgatctgctggcctccgacagcggcgtcgacatcgacgagcgcggcttc
atcttcgtcaacgatcagtgcgagaccagcgttcctggtgtctacgcgatcggcgacgtg
gtccgtggtctgatgctggcacacaaagcgtcggaagaaggcatcatggttgtcgagcgc
atcaagggtcacaagacccagatgaactacgacctgatcccgtcggttatctacacgcac
ccggaaatcgcatgggtcggtaaaaccgagcagaccttgaaggccgaaggcgttgaggtt
aacgtcggcagcttcccgttcgcggcgagcggccgtgcgatggcggcgaacgacactggc
ggtttcgtcaaagtcatcgctgacgccaaaaccgaccgtgtactgggtgtacacgtcatc
ggcccaggcgcagcagaactggtacagcagggcgcgatcggtatggaattcggcaccagt
gccgaagacatcggcatgatggtcttctcccacccgacgttgtccgaagcgctgcacgaa
gctgctttggctgtgaatggccacgccatccacatccagaacaagaaaaaacgctaa

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