KEGG   Pajaroellobacter abortibovis: BCY86_03335
Entry
BCY86_03335       CDS       T09833                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pabo  Pajaroellobacter abortibovis
Pathway
pabo03030  DNA replication
pabo03410  Base excision repair
pabo03420  Nucleotide excision repair
pabo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pabo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BCY86_03335
   03410 Base excision repair
    BCY86_03335
   03420 Nucleotide excision repair
    BCY86_03335
   03440 Homologous recombination
    BCY86_03335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pabo03032]
    BCY86_03335
   03400 DNA repair and recombination proteins [BR:pabo03400]
    BCY86_03335
Enzymes [BR:pabo01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     BCY86_03335
DNA replication proteins [BR:pabo03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BCY86_03335
DNA repair and recombination proteins [BR:pabo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     BCY86_03335
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BCY86_03335
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 DNA_polI_exo1 NYN_YacP HHH_2
Other DBs
NCBI-ProteinID: APR99817
UniProt: A0A1L6MWM7
LinkDB
Position
683770..686487
AA seq 905 aa
MLSSLLPPPNTEDVLYVLDFSGYIFRAYHAVAPLCSSQGEPTHAVFGAISMLQKLLSDRL
PHRIAVVMDSKSPTFRHDLDPRYKAHRPPPPPGLSRQMQRCEEIARAYHLSVFQEDGWEA
DDLIASLVRRAVAAGWQVVIVSSDKDLLQLLEDQGCRVLMWDSMRDRVFGPDEVRQKYGV
PPSQLRELFSLIGDASDHIPGVRGIGPKAAVDLIGRYRSVDNLYAHLASVEPSRLRMLLE
RSASDVQLSYRLITLQDVAIDWNPARLVWRPGEGDAETLRRIFKELDFHQWLKRRELSSS
AVTDLNAGPYCMFELDAVRALVEEARLLGAISFDLFTTDRNDPTRASLVGLSLAVRPEAG
GYVPLAHRYLGVPDQLSWLSVKQLLQPLFEDPRIVKVGHDLKYDLLVLSELGVEVHGHLF
DTMVASHLLNPGTIHSIEHLRQQELGIPMSTYEEITRKQRGAQMMFEEVSCEDASRYAST
AVQTCIALFERWKVRLEEQGLFTLFEEVEMPLLRVLTQMERTGVLVDPNILVQLGKTVEA
LIQQLQSRAKALAGREFAIRSRDQLETILFDELQLPVIKRTPKKGRSTDAQVLEELANHH
ELPRVILEYRELDKLKSTYIDALPKSIHHVTHRIHTHFNQAATITGRLVSYDPNLQNVPI
RTALGKQIRSAFIAPEGFCLVSGDYSQIELRVLAHLSEDEELIAAFRSGQDVHIHTATLL
FEVAPEQVTPEMRRRAKAINFGVIYGMGEAALAKSIGIEREEAARFIASYFERHQGVAQF
MKEVVEQAYRGEPIRTLLGRTRHFPALRSAHQGLRAEAERMVKNAPIQGGAADILKLAMI
QLGKPSAVPGGRLVLTVHDELVFEVEVDRLAEAKKKVREVMESAYSLRVPLVVDIGSGAN
WAQAH
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgctttcttctctccttcctcctccgaacaccgaagacgtactctatgtcctcgatttc
tcaggatatatattccgtgcataccacgctgtcgcccctctctgctcttctcagggagag
ccgacccatgcggttttcggtgcgatttcaatgttacaaaagctcctttcggatcggttg
cctcaccgcattgcagtggtcatggattctaagagtcctacgtttcgccacgatctagat
cctcgctataaagcccatcgtccccctcctcctccgggtctatcgcgtcaaatgcagcgg
tgtgaggagatcgctcgcgcttatcatctttctgtatttcaagaggatggttgggaggca
gatgatctgatcgcttcgcttgtgcgaagagcggtggcagcagggtggcaagttgtgatt
gtgagctcggataaggatcttttgcagctgcttgaagaccaaggctgtcgtgtgttgatg
tgggactcgatgagagatcgtgtctttggtcccgatgaagtaagacaaaaatatggagtt
ccgccgagccagctgcgcgaactgttttcgctgattggggatgcttccgatcatatcccc
ggtgtccgcggaatcggtcccaaagcggctgttgatctgatcgggcggtatcgctctgtc
gataacctatatgcccatctcgcttcggtagagccatctcgcttgcgcatgctccttgag
cgttccgcgtcggatgttcaactctcttatcgattgatcacgctgcaggatgttgcgatc
gattggaatcctgctcgccttgtgtggcgccctggagaaggtgatgcagaaacgctgcgt
cggatttttaaagagttggattttcatcagtggctcaaacggagggagctgtcttcatct
gctgttacggacttgaatgccgggccttactgtatgttcgaattagatgcagtgcgcgcg
ctcgtggaggaagcgcgtttgcttggtgcgatcagcttcgatctcttcacgaccgatcga
aatgaccccacgcgagcttctttggttgggctttcgcttgctgttcgtccagaggcagga
gggtatgtcccacttgcgcaccgctatttaggagttcctgatcaactctcttggttgtct
gtgaaacagctccttcagcctctttttgaagatcctcggatcgtcaaagtggggcatgac
ctcaagtatgatcttttggtcctctccgaactcggggtggaagttcatggtcatctcttt
gacacgatggtggctagtcatctgcttaatccaggtacgattcactcgattgaacatcta
agacaacaagagctggggataccgatgtcgacctacgaggagattacgcggaaacagcgc
ggggctcagatgatgttcgaagaggtctcctgtgaggacgcatcgcgctacgcgtcgact
gcggtgcagacgtgtatagcgctgtttgagaggtggaaagtccgtttagaggaacaggga
ctctttaccctgtttgaagaagtggagatgccgctcctgcgtgtgctcactcaaatggag
cggactggggtgcttgtcgatccgaacattctggtgcagctaggcaaaacagtagaagct
ttaattcagcagctacaatcgcgggcaaaggcattagcagggcgggagtttgctatccgt
tctcgcgatcagctcgaaaccattttgttcgacgagctccaattgcctgttatcaaacgc
acccctaagaaagggaggtcgaccgatgcacaagtccttgaggaactcgccaatcaccat
gaattgccgcgagttatcctcgaataccgagaactcgataagctgaaatccacctatatt
gatgctttgcccaaatcaattcaccatgtaacgcatcggattcatacgcatttcaatcag
gctgcgaccatcacagggcgacttgtttcgtacgatccaaacctacagaatgtgccgatt
cgaacggcccttggaaaacagattcgctcggcgtttattgccccggaggggttttgtctg
gtgagtggcgactattctcagatcgaattgagagtactggctcatttgtctgaagatgag
gagttgatcgctgcatttcgatccggtcaagatgtccatatccatacggctacgcttctt
tttgaagtggcgccagaacaagtcacaccggaaatgcgtcgtcgcgccaaggcgattaat
tttggggtcatctatgggatgggggaagcagccttagcgaagagcatcgggattgaacga
gaggaggcagctcgttttatcgcttcctatttcgagcggcatcagggggtggctcaattt
atgaaagaggtagttgaacaagcgtatcgcggagaaccgattcgcaccctattggggaga
acgcgtcatttccctgctctccgatctgctcatcaggggcttcgcgcagaagcggaacgg
atggtcaaaaatgctccgattcaaggaggggcagcagatattttgaaactcgccatgatt
cagctcggaaagccttcggccgtgccagggggacggctggtcctcacggttcatgatgag
cttgtctttgaagtagaagtggatcggctggcggaggccaagaagaaagtgcgggaggtg
atggaatccgcttattccctgcgtgttcctcttgttgtggatattggaagtggggctaat
tgggcccaggcgcattaa

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