Pajaroellobacter abortibovis: BCY86_04110
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Entry
BCY86_04110 CDS
T09833
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pabo
Pajaroellobacter abortibovis
Pathway
pabo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pabo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BCY86_04110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pabo03400
]
BCY86_04110
Enzymes [BR:
pabo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BCY86_04110
DNA repair and recombination proteins [BR:
pabo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BCY86_04110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
SH3_13
NAT10_TcmA_helicase
SLFN-g3_helicase
nSTAND3
PhoH
AAA_16
AAA_22
Herpes_Helicase
PcrA_UvrD_tudor
NTPase_1
Mg_chelatase
AAA
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
APR99956
UniProt:
A0A1L6MWP4
LinkDB
All DBs
Position
837904..839991
Genome browser
AA seq
695 aa
AA seq
DB search
MDFSNRSCGNVSYASFGAGALQFLKRGGGERVRTDSAYEEIRTLLKSAPQRQWGEELLSI
AWEIVESVEPPCSEIHKTPLGFLVLASLLSVRYGHTRLPFRGEGKATFQNIMEELGVPLC
IQQQIMRWLEESHIPTELQSIIGHGGEAKPIVIERGALALHKLYRMEKVLAQWVQSHADS
AQQQIDKNAMDAAVQDVYQRPPFWKKKPMWLSLEQKKAVEAAALSNVLLITGGPGTGKTS
VVVSILRMLVRLGLSPHQMALVGPTGKAARCLDKSVRTSLEAIDSPSLEDRELLTEVPRA
QTIHSLLRYVPSTDTFRHHSLSRLPYQLVCVDEASMVDVSLMVYLVQALCDTTRFILLGD
VDQLPSVEPGAVFRDLLSIPSEKNQEKWCTARLTENFRIQSEERREEGILSISYQIRSGQ
VPSSFTSPSCFQSMDSPFSFEAIRRKDAELLEGEWTAMEDPFLKKWFQTHIEPASSLRKV
IQTTYPFPMNGASMDMYPELRSLLLHYEKSRILGATYFVREGGGMDQINQKLHQHMLKFI
QPYHLDYIGSFPFCPGEPVLLYQNDYTHGLRNGDQGIVLRIKQAEKEQELAVAFLSFQGC
QEELLLFPLFLLADRLEHAYAMTVHKSQGSEFDHVALILPQAATPFLTRELIYTAITRSR
TSVVILGQLSILHQGITRTTPRHTWLPHLLQTCMM
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggatttttccaatcggagttgcgggaacgtctcttatgcctcttttggtgctggagcg
ttgcagttcttaaaaaggggaggaggagaaagggtacggacggattctgcttacgaggaa
atacgaactttacttaagagtgctccacagcgacagtggggggaggaactcttaagtatc
gcgtgggagattgtcgaatctgttgaaccaccttgttctgagatccataagactcctctt
ggttttctcgttttagcctctctgttgagtgttcgatatggtcatacgagacttcccttt
cgaggcgaggggaaagctacatttcagaacatcatggaggaattgggagtccctttatgc
attcagcaacagatcatgcggtggttagaggagagtcatatccctactgaacttcaatca
atcattgggcatggtggggaggcgaaacccattgtaatagaacgaggtgcgcttgcctta
cacaaattgtataggatggaaaaggtgctcgcccaatgggttcaaagtcatgcggatagt
gcacaacagcagatagacaagaacgctatggatgcagcagtccaagatgtatatcaacgt
cctccattctggaagaaaaagcctatgtggctatccttagaacagaagaaagctgttgag
gctgctgctctttctaacgttctcttgattacaggaggccctgggactgggaagacttca
gtggtggtttctattcttagaatgttggtccgtctaggcctttcccctcaccaaatggct
cttgtaggacctactggcaaggctgctagatgtctcgataagtcagttcgtactagcctt
gaagcaatagacagtccatctcttgaggacagggaactactaactgaagttccgagagct
caaaccatccatagccttttgaggtatgtgccttctacggacacattccgtcaccattcc
ttatccagactcccttaccagctggtttgtgtcgatgaagcttcgatggtagacgtttct
ctaatggtctatctggttcaagcgctctgtgatacaacccgcttcattctgttaggagat
gtggatcagttgccttctgttgaacctggagcagtcttccgcgaccttctcagtatccct
tctgaaaaaaaccaggagaaatggtgtactgcacgcctcacagaaaactttcgaatccaa
tcggaagaaaggagagaagaagggattttatccatatcctatcaaatacgcagtggccag
gtcccctcttcttttacttctccttcctgctttcaaagcatggatagccccttttctttc
gaagcaatccgccggaaagacgctgaattgttagaaggggaatggactgcgatggaagat
ccatttctcaaaaagtggtttcagactcatatcgaacctgcctcttcactcagaaaagtc
attcagaccacctatccatttccaatgaacggggcttccatggatatgtatccagagctc
cgctctctcttactgcattacgaaaaaagcaggattcttggagctacttattttgttcga
gaagggggagggatggatcagatcaatcagaaacttcatcagcatatgctgaaattcatc
caaccgtatcatttggattatataggatcctttcctttttgtccaggcgaacctgttctg
ctgtatcagaacgattacacccatggtttacgcaatggagatcaaggaattgtgctgcgg
attaaacaagcagagaaagaacaagaacttgccgtcgcatttttatcttttcaaggctgc
caagaagaactcctcttatttcccttatttctgctggccgatagattggaacacgcctat
gcaatgacggtccataaatcccaaggatccgaattcgatcacgtagctctcatacttccc
caagcagccaccccctttttgacccgagaattgatctacacagccataacccgaagccgc
acctccgtcgtcatcctaggtcagctatccatacttcaccaaggcatcacccgcaccact
ccccgccacacttggcttccccatttgctccagacctgtatgatgtga
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