Pajaroellobacter abortibovis: BCY86_05500
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Entry
BCY86_05500 CDS
T09833
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pabo
Pajaroellobacter abortibovis
Pathway
pabo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pabo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BCY86_05500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pabo03019
]
BCY86_05500
03016 Transfer RNA biogenesis [BR:
pabo03016
]
BCY86_05500
Enzymes [BR:
pabo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BCY86_05500
Messenger RNA biogenesis [BR:
pabo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BCY86_05500
Transfer RNA biogenesis [BR:
pabo03016
]
Prokaryotic type
tRNA degradation factors
BCY86_05500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
OB_RRP5_4th
DUF6154
KH_2
Motif
Other DBs
NCBI-ProteinID:
APS00195
UniProt:
A0A1L6MXL9
LinkDB
All DBs
Position
1120571..1122817
Genome browser
AA seq
748 aa
AA seq
DB search
MTFVRESVEINGKPFTIETGRLAKFAHGSVVVTYGESVVLVTAVSGEVRPGLDFFPLTCE
YIEKAAAAGKFPGGFFKREGRQRDEEILVSRLIDRPCRPLFPEGYRNDTQVIATVLSLDR
DNPTDVLSVTGAAAALHISNIPWNGPLCGIRVARVEGKWIAFPTFEEQVKADINLVVAVS
RNAIVMVEGEANEATEEDIVAALEFARQASEPVLHLIDRIRQLTGKEKQPFEPVSLEEKI
AERVREICDPPLKEATLIKEKEKRYEAYKGIKEKLCAALTSELGEEAFSDLEKLIREEFE
ARKYHLVRDYILTQHTRIDGRKAKEIRPIATEVGLLPRAHGSALFQRGETQAMVTTTLGT
SSDEQKIDALTGERWKRFLVHYNFPPFATGEVKPLRGPNRREIGHGALAERALAHVIPSQ
EHFPYTIRVVSETLESNGSSSMAAVCGGTLSLMDAGVPIKAPVAGIAMGLITDGKQAFVL
SDILGDEDHLGDMDFKVCGTAQGITAIQMDIKVSGLKSEVLMEALAQAREGRLFILNKML
ETLNSPRNELSKHAPRITTIKINPDQIRLVIGPGGKTIKGIIDQTGVAIDVEDNGIVHVA
SSDSEAVQKALGIIKRITAEPEVGAIYKGIVQRITTFGAFVELLPGIDGLLHISEIAHHR
VERVEDVLKEGDSIEIKVIEISRDGKIRLTRRELLPSPDGEKGEWTRERMMAAREVGTSG
CGGDYPRGSSRLGDRPRRDSPRSSSRRG
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgtgcgcgagtccgttgagatcaatggcaagcctttcaccattgaaacaggt
agactagcaaagttcgctcacggttcagtcgtcgtcacttatggtgaaagcgtcgtcctg
gtaactgctgtatcaggagaagttcgccctgggctcgatttttttccattgacttgcgaa
tacattgagaaagcagcagcagctggaaagtttccaggtggattttttaaacgtgaaggg
agacagcgagatgaggaaattctcgtcagcaggttgatcgataggccctgtcgtccccta
tttcctgaaggatacagaaatgatacccaagtgattgcaactgtgctctcattggatcga
gacaatccaacagatgtactttctgtgactggggcagccgcagcacttcatatttccaac
atcccgtggaatggacctctgtgcggcattcgcgttgcccgggtcgaagggaagtggatt
gctttccccactttcgaagaacaagttaaagcagatattaacttggtagtcgccgtttca
agaaatgcgattgttatggtcgaaggggaagcgaatgaagcaactgaagaagatattgtg
gcagcgcttgaattcgcgcgccaagcctctgaacctgtcctccacttgatcgatcggatc
cgacaacttacaggaaaggagaaacaaccgtttgagcccgtttccctagaagaaaagatt
gccgaacgtgtccgagaaatctgcgatcctcccctcaaggaagctacgctgatcaaagag
aaagagaagcgctatgaagcttacaaggggatcaaagaaaagctgtgcgctgcgctgact
tcagagttaggggaagaagcattctccgatctagaaaaacttatccgcgaagaattcgag
gcgcgcaagtaccacctggttcgggactacatcctcacccagcacacccgcattgacggg
cgcaaagcaaaagaaattcgacctattgctacagaagtaggattgttgcctcgagcacat
ggttcagcgctattccaaaggggagaaacccaagcgatggtaaccacaacccttggcact
tcaagcgatgaacaaaaaatcgatgcgctcacaggagaacggtggaaacgttttctggtt
cattataatttcccaccgtttgctacaggagaagtcaaaccattgcgaggtccgaaccga
cgtgaaattggccatggcgccctggcagaacgagcgctcgcgcatgtaatcccttcccaa
gaacatttcccttataccattcgagtggtttcagaaacccttgaatcgaacggttcttcg
tccatggctgctgtatgtggaggaacgctttctctgatggacgccggtgttcctatcaaa
gcccctgtggccggaattgcaatggggttaattacagatggaaaacaggcctttgttcta
agcgatattctaggagatgaagatcacctaggggatatggacttcaaagtttgtggtaca
gctcaaggaatcacagcgatccaaatggacattaaagtttctggattaaaatcagaggtt
ttgatggaggccctcgcccaagcaagagaaggaaggctcttcattcttaataaaatgctc
gaaacgctgaattccccaagaaatgagttatcaaagcacgccccgcggatcacaacgatc
aagatcaatcctgatcagattcgtctcgtgatcggtccaggtggaaaaacgatcaaaggg
attattgatcagacgggcgttgcgattgatgttgaagataacggcatagtccatgtcgcc
tcttccgattcagaagcggtccaaaaagcacttgggataatcaaaaggattacagctgaa
ccagaagtcggcgcgatttataagggaattgttcaacgcattaccactttcggcgctttc
gtagagcttctccccggaatcgatggtctccttcacatttccgaaatcgctcaccatcgc
gtcgaacgcgtggaagatgtcctcaaggaaggggattcgattgaaatcaaagtgatcgag
atttcgcgggatgggaaaatccgcctgacccgccgagagctcttgccctctcccgatgga
gaaaaaggagaatggactcgagagcggatgatggctgcacgtgaagtagggacctcagga
tgcggaggagattacccgaggggttcaagcagattgggagaccgtccacggcgtgattca
ccgagatcgagctcccggcgtggttaa
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