Polycladomyces abyssicola: JIR001_00070
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Entry
JIR001_00070 CDS
T07192
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pabs
Polycladomyces abyssicola
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pabs03032
]
JIR001_00070 (gyrA)
03400 DNA repair and recombination proteins [BR:
pabs03400
]
JIR001_00070 (gyrA)
Enzymes [BR:
pabs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JIR001_00070 (gyrA)
DNA replication proteins [BR:
pabs03032
]
Prokaryotic type
DNA Topoisomerases
JIR001_00070 (gyrA)
DNA repair and recombination proteins [BR:
pabs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JIR001_00070 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Noelin-1
Motif
Other DBs
NCBI-ProteinID:
BCU80224
UniProt:
A0A8D5UBZ4
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Position
6845..9295
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AA seq
816 aa
AA seq
DB search
MPEGTERIQEVNISQEMRNSFLDYAMSVIVSRALPDVRDGLKPVHRRILYTMFDLGMTPD
KPYKKSSRVVGNVTAQFHPHGDAAVYDAMVRMAQDFSYRYMLVDGHGNFGSVDGDAPAAM
RYTEARMAPITLELLRDIHKDTIDFGPNYDGQQEEPLVLPARFPNLLVNGASGIAVGMAT
NIPPHNLREAIDGLILMIDNPDVTIDELMKKIKGPDFPTGGIIMGKDGIKKAYRTGRGSI
QIRAKTRIEEANNGKMRIVVEELPYQVNKAKLVEKIAELVRDKKIEGITDLRDESDRNGM
RVVIELRRDVNPQIILNNLFKHTALQTSFGVIMLALVDGQPRILNLKQLLHHYLEHQIEV
IRRRTAYDLRKAEERAHILEGLRIALDHIDEVIALIRGSRTAQEARDGLMERFGLSEKQA
QAILDMRLQRLTGLEREKIEDEYQELQKLIAHLRDILSSEDKIRGVVREELLEIREKFGD
DRRTRIRAKADEIDEEDLIPEEEVAILLTHRGYIKRMPLSTYRAQKRGGRGITGMGTRED
DFVQHLFVTHSHNHLLFFSNKGKVYRLKAYEVPELGRTARGTPIINLIQIDQDEYIHAVI
PVKEFAQDKFLFFATRHGVVKKTALQEFENIRRNGLFAINLREGDELVGVHLTDGNQEVL
LGTKYGMSIRFPEQEVREMGRAATGVKGITLAEGDEVIDMDVATDGLDVMIVTSKGYGKR
TPLEEYRVQSRGGKGIKTLSLNKRKGFVVAHKVVSPEEDLMIVTTGGVVNRQKIAGISTQ
GRYAQGVKLIHLKEGEEVATVAPVHKEEENGEETSE
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagggaaccgagcgcatacaagaagtgaatatcagccaggagatgcgcaactcg
tttttggactacgcgatgagcgtcatcgtcagccgggccctgccggacgtccgggatgga
ttgaaaccggtgcaccgccggattctctacaccatgtttgacttggggatgaccccggac
aaaccgtacaaaaaatcgtcccgcgtcgtcgggaacgtgaccgctcagttccacccgcac
ggcgatgcggccgtgtacgacgcgatggttcggatggcacaggatttctcctaccgctac
atgctggtggacggtcacggcaacttcggttccgttgacggggacgcacccgctgcgatg
cggtacaccgaagcccggatggcgccgatcaccttggagctgctgcgggacatccacaaa
gacacgatcgacttcggtcccaactatgacggtcaacaagaagaaccgctggtgttgcct
gcccgtttccccaacctgctggtcaacggggcatcgggcatcgccgtcgggatggccacc
aacatccccccgcacaacctgcgggaagcgattgacggcttgatcctgatgatcgacaac
cccgatgtgacgatcgatgaattgatgaaaaagatcaaaggaccggatttccccaccggc
ggcatcatcatgggcaaggacggcatcaagaaggcttaccggaccggccggggcagcatc
cagatccgggccaaaacgaggatcgaggaagccaacaacggcaagatgcgcatcgtggtc
gaagagttgccgtatcaggtgaacaaggcaaaattggtggagaaaatcgccgaactggtg
cgggacaaaaagatcgaaggcatcaccgacctgcgcgatgaatcagaccgcaacggtatg
cgtgtcgtcatcgaattgcgccgggatgtcaatccgcaaatcatcttaaacaacttgttc
aaacacaccgccctgcaaaccagcttcggcgtgatcatgttggccttggtggacggtcag
ccgcggattctcaatctgaagcaactgctccatcactatctggagcatcagattgaggtg
atccgccgccgtacggcgtacgatctgcgcaaagcggaagagcgagcccacatcctcgaa
gggctgcgcatcgcgttggatcacatcgacgaagtgatcgctttgattcgcggctcacgc
accgcgcaggaagcacgcgacgggctgatggaacggttcggcttgtctgagaagcaggca
caggcgatcctggacatgcgcctgcaacgattgaccggcttggagcgggagaaaatcgaa
gatgagtatcaggaactgcaaaaattgatcgcccacttgcgcgacatcttgtccagcgaa
gacaaaattcgcggggtggtacgcgaggaactgttggaaatccgcgagaaattcggggat
gatcggcggacgcggattcgcgccaaagcggacgaaatcgatgaggaagacctgattccg
gaagaagaggtggcgatcctgctcacccatcgcgggtacatcaaacggatgccgctgtcc
acctaccgtgcgcaaaagcgtggcggtcgcggcatcactggcatgggcacgcgggaggat
gactttgtccagcacctgttcgtcactcattcgcataaccacctcttgttcttctccaac
aaggggaaagtctatcggctcaaagcgtatgaagtgccggagttggggcggacggcccgg
ggaacgccaatcatcaacctgatccagatcgatcaggatgaatacatccatgcggtcatc
ccggtcaaggagttcgcccaagacaaattcctgttcttcgccacccggcacggtgtcgtg
aaaaagacggcattgcaggagtttgagaacatccggcgtaacggcttgttcgccattaac
ttacgtgaaggtgacgagctggtcggcgtccacctgaccgacggcaaccaggaagtcttg
ctgggaaccaagtatggcatgtccatccgcttcccggaacaggaagtcagggaaatgggc
cgggcggccacaggagtgaaagggatcaccctcgccgagggggatgaagtgattgatatg
gacgtcgccacggatggtttggatgtgatgatcgtcacttccaaagggtatggcaagcgg
accccgctggaagaatatcgcgtacaatcccgtggcggcaaggggatcaagacactcagt
ctgaacaaacggaagggattcgtcgtcgcacacaaagtggtatcgccggaagaggatctc
atgatcgtcaccaccggcggcgtcgtgaaccggcagaaaatcgcgggtatctccacgcag
ggacgctatgctcagggcgtcaagctgattcacctgaaagagggagaggaagtagccacc
gttgcaccggttcacaaggaagaggaaaacggagaagagacgagtgaatag
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