Polycladomyces abyssicola: JIR001_00760
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Entry
JIR001_00760 CDS
T07192
Symbol
hup_1
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
pabs
Polycladomyces abyssicola
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pabs03032
]
JIR001_00760 (hup_1)
03036 Chromosome and associated proteins [BR:
pabs03036
]
JIR001_00760 (hup_1)
03400 DNA repair and recombination proteins [BR:
pabs03400
]
JIR001_00760 (hup_1)
DNA replication proteins [BR:
pabs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JIR001_00760 (hup_1)
Chromosome and associated proteins [BR:
pabs03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JIR001_00760 (hup_1)
DNA repair and recombination proteins [BR:
pabs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JIR001_00760 (hup_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
BCU80293
UniProt:
A0A8D5UCP7
LinkDB
All DBs
Position
87430..87702
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AA seq
90 aa
AA seq
DB search
MNKQDLITRISQNSGMTKKDVEAVINHFLNEITQALSEGEKVQLIGFGTFETRKRSGRVG
RNPQTGATIEIPESQVPAFRAGSRLKEAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagcaggatttgatcacccgcatctctcaaaacagcgggatgaccaaaaaagac
gtcgaagcggtcatcaaccactttttaaatgaaattacgcaagcgctcagcgaaggtgag
aaggtccaactgatcggctttgggacatttgaaacgcgcaaacgttccggccgagtcgga
cggaatccgcagacgggggcgacgattgaaattccggaatcccaagtgcctgccttccgt
gcaggcagccggctgaaagaagccgtgaagtaa
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