Polycladomyces abyssicola: JIR001_02630
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Entry
JIR001_02630 CDS
T07192
Symbol
sigB
Name
(GenBank) RNA polymerase sigma-B factor
KO
K03090
RNA polymerase sigma-B factor
Organism
pabs
Polycladomyces abyssicola
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pabs03021
]
JIR001_02630 (sigB)
Transcription machinery [BR:
pabs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JIR001_02630 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
DUF134
GerE
KORA
HTH_3
TnsD
HTH_23
IF2_N
HTH_37
DUF1492
HVO_0513_N
HNF-1_N
HTH_50
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BCU80480
UniProt:
A0A8D5UCA7
LinkDB
All DBs
Position
274621..275406
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AA seq
261 aa
AA seq
DB search
MSTRPQKPDLTDAEVLEKIRQYQESGDSAIQEELISHYTELVETLASKFARGSEPYEDLV
QVGMIGLLAALKRYDPAYGRSFEGFAVPTIVGEIKRYIRDKTWSVHVPRRIKELGPRIKK
AVEELTSKLHRSPQIEEIAQYLNVTPEEVLETMEMGRSYNAVSVDTPIEASSDGSQVTLL
DIVGDEDEGYEHVDQRMLLEKALQVLTEREREIIRMTFYENMSQKQAGERLGISQMHVSR
LQRRALRKLRETLRLEPSECM
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcgactcgcccacagaaacccgatctcactgacgcagaggtattggagaagattcgt
cagtaccaggagagcggagacagtgccattcaggaagaactgatctcgcattacaccgaa
ctggtggaaactttggcgtccaaattcgcccggggcagtgaaccttacgaagacctcgta
caagtggggatgatcggtctcctggctgcattgaagcggtatgatcccgcctatggccgg
agtttcgagggatttgccgtgcccacgatcgtcggagaaatcaaacggtacatccgtgac
aaaacgtggagcgtacatgtgccacgtcgcatcaaagagctgggaccacgcatcaaaaaa
gcagtagaagaactgacttcgaaactgcaccgatctccgcagatcgaagagatcgcccaa
tacctcaacgtgacgcccgaggaagtgttggaaacgatggagatgggtcgcagttacaac
gccgtttccgtcgacactccgatcgaggcgagcagtgatggttcacaggtgacgctgttg
gacatcgtgggagatgaagatgaaggttatgagcatgtggaccagcggatgctgctggaa
aaagcgttgcaggtattgactgagcgtgaacgggaaatcatccgtatgacgttttatgaa
aatatgagccagaaacaggctggagaacgacttggcatttcccagatgcacgtatcccgt
cttcagcggcgagccttgcgaaaactaagggaaacgctgaggctggagccctcggaatgc
atgtga
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