Polycladomyces abyssicola: JIR001_03320
Help
Entry
JIR001_03320 CDS
T07192
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pabs
Polycladomyces abyssicola
Pathway
pabs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JIR001_03320 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pabs03019
]
JIR001_03320 (groL)
03110 Chaperones and folding catalysts [BR:
pabs03110
]
JIR001_03320 (groL)
03029 Mitochondrial biogenesis [BR:
pabs03029
]
JIR001_03320 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pabs04147
]
JIR001_03320 (groL)
Enzymes [BR:
pabs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
JIR001_03320 (groL)
Messenger RNA biogenesis [BR:
pabs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
JIR001_03320 (groL)
Chaperones and folding catalysts [BR:
pabs03110
]
Heat shock proteins
HSP60 / Chaperonin
JIR001_03320 (groL)
Mitochondrial biogenesis [BR:
pabs03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
JIR001_03320 (groL)
Exosome [BR:
pabs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JIR001_03320 (groL)
Exosomal proteins of other body fluids (saliva and urine)
JIR001_03320 (groL)
Exosomal proteins of breast cancer cells
JIR001_03320 (groL)
Exosomal proteins of colorectal cancer cells
JIR001_03320 (groL)
Exosomal proteins of bladder cancer cells
JIR001_03320 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
EAD9
THOC7
DUF7342
Motif
Other DBs
NCBI-ProteinID:
BCU80549
UniProt:
A0A8D5ZJH6
LinkDB
All DBs
Position
344175..345800
Genome browser
AA seq
541 aa
AA seq
DB search
MAKEIKFSEDARRAMLRGVDALANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE
LEDPFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAIIREGLKNVAAGANPMILRKGIE
KAVAAAVEEIKKIAKPIEGKESIAQVAAISANDDEVGQLIAEAMEKVGKDGVITVEESKG
FTTELEVVEGMQFDRGYISPYMITDTDKMEAVLEEPYILITDKKISNIQDILPLLEKVVQ
QGKQLLIIAEDVEGEALATLVVNKLRGTFTAVAVKAPGFGDRRKAMLGDIATLTGGQVIT
EELGLDLKTANISYLGRARQVRVSKEETIIVDGYGDKAEIESRIKQIRQQIEETTSEFDK
EKLQERLAKLAGGVAVIKVGAATETEMKEKKLRIEDALNATRAAVEEGIVAGGGTALVNA
IRAVEAVEASGDEKTGVNIIKRALEEPVRQIAFNAGLEGSIIVERLKKEDVGIGFNALTG
EWVDMIKAGVVDPAKVTRSALQNAASVAMMVLTTEAVVADKPEEEKGNNNNSGMGGMDGM
M
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagaaatcaaatttagtgaagatgcgcgtcgtgcgatgttgcgcggtgtggac
gcgctggcgaacgctgtgaaagtaaccttgggtccgaaaggacgtaacgtggtactggag
aaaaaattcggttctccgctcatcaccaacgatggtgtgaccatcgcgaaagaaatcgaa
ctcgaagatccgtttgaaaacatgggcgcccaactggtgaaagaagtggcgaccaaaacc
aacgatgtggctggtgacggtacgaccaccgctaccgtgttggctcaagccatcattcgt
gaaggtctgaaaaacgtggcggccggcgccaacccgatgatcctgcgcaaagggatcgaa
aaagccgtggccgctgccgtggaagaaatcaaaaagatcgcgaaaccgatcgaaggtaaa
gaatctatcgctcaagtggccgcgatctccgcgaacgacgatgaagtgggccaactgatc
gcggaagcgatggaaaaagtgggcaaagacggcgtgatcacggtcgaagaatccaaaggc
ttcaccaccgagctggaagtggtggaagggatgcaattcgaccgcggctacatctccccg
tacatgattacggacacggacaagatggaagccgtgctggaagagccgtacatcctgatc
accgacaagaaaatctccaacatccaagacattctgccgctgcttgaaaaagtggtgcaa
caaggcaagcagctcctcatcatcgccgaagatgtggaaggtgaagccttggcgaccctg
gtggtcaacaaactgcgcggaaccttcaccgctgtggctgtgaaagcacctggcttcggc
gatcgccgcaaagcgatgttgggagacatcgccacgctcaccggtggtcaagtcatcacc
gaagagctgggtctggatctcaaaacggccaacatcagctatctgggtcgcgcgcgtcaa
gtccgcgtctccaaagaagaaaccatcatcgtggatggttatggtgacaaagcggaaatc
gaatcccgcatcaaacaaatccgtcaacaaatcgaagaaaccacgtctgaatttgacaaa
gaaaaactgcaagagcgtctggccaaactggctggcggcgtagcggtcatcaaagtgggt
gccgcgaccgaaaccgaaatgaaagagaaaaaactgcgcatcgaagacgcgctcaacgct
actcgcgccgcggtggaagaaggtatcgtggctggtggcggtaccgcgttggtcaacgcc
atccgcgcggtggaagcggtggaagcgtccggcgacgaaaaaaccggtgtcaacatcatc
aaacgtgcgttggaagagccggtacgtcaaatcgctttcaacgctggtttggaaggttcc
atcatcgtggagcgcctgaaaaaagaagatgtgggcatcggattcaacgccctgaccggc
gagtgggtcgacatgatcaaagctggtgttgtggatccggccaaagtgacccgctccgcg
ctgcaaaatgccgcttccgtggccatgatggtgctcaccaccgaagctgttgtggccgac
aaaccggaagaggaaaaaggcaacaacaacaactcgggcatgggcggcatggacgggatg
atgtaa
DBGET
integrated database retrieval system
