Polycladomyces abyssicola: JIR001_05010
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Entry
JIR001_05010 CDS
T07192
Symbol
citB
Name
(GenBank) aconitate hydratase
KO
K27802
aconitate hydratase A / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
pabs
Polycladomyces abyssicola
Pathway
pabs00020
Citrate cycle (TCA cycle)
pabs00630
Glyoxylate and dicarboxylate metabolism
pabs00640
Propanoate metabolism
pabs00720
Other carbon fixation pathways
pabs01100
Metabolic pathways
pabs01120
Microbial metabolism in diverse environments
pabs01200
Carbon metabolism
pabs01210
2-Oxocarboxylic acid metabolism
pabs01230
Biosynthesis of amino acids
Module
pabs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pabs_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
pabs_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JIR001_05010 (citB)
00630 Glyoxylate and dicarboxylate metabolism
JIR001_05010 (citB)
00640 Propanoate metabolism
JIR001_05010 (citB)
09102 Energy metabolism
00720 Other carbon fixation pathways
JIR001_05010 (citB)
Enzymes [BR:
pabs01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
JIR001_05010 (citB)
4.2.1.99 2-methylisocitrate dehydratase
JIR001_05010 (citB)
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
BCU80718
UniProt:
A0A8D5ZMW7
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All DBs
Position
complement(516247..518967)
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AA seq
906 aa
AA seq
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MPNDVFGVRSQLESGGKTYTYYRLQGLEEQGLGKVSRLPFSIKVLLEAAVRQCDGKAVTE
EHVKQLARWAEERSDKEVAFKPARIVLQDFTGVPAVVDLAALRSAMKRVGGDPSRINPLI
PVDLVIDHSVMVDKYGTEDALEYNMNVEFERNEERYRLLRWAQEAFDNFRAVPPATGIVH
QVNLEYLATVVATREVDGRTEVFPDSLVGTDSHTTMINGLGVVGWGVGGIEAEAGMLGQP
LYFVTPEVVGFKLTGKLPEGATATDLALTVTEMLRKKGVVGKFVEFYGPGLSNISLADRA
TVANMAPEYGATMGFFPVDEESLNYLRNTGRDEKLVQLVEDYCKAQGLFRTDDTPDPIFS
DTIELDLSTVVPSLAGPKRPQDRIELKDMKKAWNDTLRKPVEERGFGLSEEEVAKTAEVQ
ADGESFTLKNGSVVIAAITSCTNTSNPSVMLGAGLVAKKAVEKGLKVPAYVKTSLTPGSK
VVTDYLKEAGLIEPLAQLGFTVAGYGCATCIGNSGPLPEAVAKAIEENDLTVASVLSGNR
NFEGRIHPLVKANYLASPPLVIVYALAGTVDIDLLNEPIGYGHDNQPVYLKDIWPSAQEI
RDVMNQAMNPEQFKKQYSRVFDANERWNNLPTPKGELYDWDPKSTYIQEPPFFVNLSPDV
EPIKEIRGARALAVLGDSVTTDHISPAGAIAPDSPAGKYLREHGVEPKDFNSYGSRRGND
RVMTRGTFANIRIRNLMVPGTEGGVTKFLPTGEVMPIYDAAMKYKEQNTPLVVLAGKEYG
TGSSRDWAAKGTNLLGVKAVIAESFERIHRSNLVGMGVLPLQFVEGQNAKTLNLTGEETF
DIIGLSDDMQPNQTLKVRATKADGTTVEFDVISRLDSVVDIEYYRNGGILQTVLRQILNN
TEQVNA
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacgacgtgtttggtgtacgttcccagcttgaatcgggcggtaaaacgtacaca
tactaccgcctgcaagggctggaggaacaaggactgggcaaggtttcccgcttgccattc
tccatcaaagtgttgttggaagcggcagtccgtcagtgtgacggaaaagccgtgactgag
gagcatgtgaaacaactggcccggtgggcggaagaacgttcggataaagaagtggccttc
aaaccggcccggatcgtgttgcaagactttaccggcgtaccggccgtcgttgacttggcc
gcgcttcgttccgcgatgaaacgggtgggtggagatccgtctcggatcaatcccctgatc
ccggtggatctcgtgatcgaccactccgtcatggtggacaaatacggcactgaggatgcc
ctggaatacaacatgaacgtggaattcgaacggaacgaggaacgctatcgcctgctccgt
tgggcgcaggaagcgtttgacaacttccgtgcggttccgccggcaaccgggattgtgcac
caagtcaacctggaatacctggcaacggtagtggccacccgcgaagtggacggccgtacc
gaagtgttcccggattcgcttgtcggcaccgactcccacaccacgatgatcaacggtttg
ggcgttgtgggttggggagttggcggcatcgaggcggaagcgggcatgttgggtcaaccg
ttgtacttcgtgacacccgaggtggttggctttaagctgaccggcaaattgccggaaggc
gccactgcgaccgacctggctttgaccgtcaccgaaatgttgcggaaaaaaggcgttgtt
ggcaaattcgtggaattctacggaccgggtctgtccaacatcagcctggctgaccgggcc
actgtggccaacatggcgccggaatacggagcgacgatgggcttcttcccggtggacgaa
gagtccctcaactatctgcgcaacaccggccgcgacgaaaagctggttcagctggtggaa
gactactgcaaagcgcaaggcctgttccgcaccgacgatacgccggacccgatcttcagc
gacaccatcgagctggatctgtccacggtggttcccagcttggccggtccgaaacgccca
caagaccggatcgaattgaaagacatgaaaaaagcctggaacgacaccttgcgcaaaccg
gtggaagaacgcggcttcggactgtccgaggaggaagtcgccaaaaccgctgaagtgcaa
gcggacggtgagtccttcacgttgaaaaacggttccgtcgtgatcgccgccatcaccagc
tgtaccaacacgtccaacccgtcggtgatgctgggtgccggcttggtggcgaaaaaagcg
gtggaaaaaggactgaaagtgccggcctatgtcaaaaccagcttgacgccgggttccaag
gtcgtcaccgactacctgaaagaagccggtctgatcgaaccgctggcccaactcggcttt
accgtggccggttacggatgcgccacctgtatcgggaacagcggtccgctgccggaagcg
gtggccaaagcgatcgaagagaacgacctgaccgtcgcttctgtactgagcggtaaccgg
aacttcgagggacggattcacccgttggtaaaagccaactatctcgcatctccgccgctg
gtcatcgtttacgcgcttgccggtacggtggacatcgatctgttgaacgaaccgatcggt
tacggccacgacaaccaaccggtctacctgaaagacatctggccgagcgcgcaggaaatc
cgcgacgtgatgaaccaagcgatgaatccggaacagttcaagaagcaatacagccgcgtc
ttcgacgccaacgaacggtggaacaacctgcccacgcccaaaggcgaactgtacgattgg
gatcccaaatccacgtacattcaagaaccgccgttcttcgtcaacctgtccccggatgtg
gagccgatcaaggaaatccgcggcgcacgcgcgttggccgtattgggcgactcggtcacg
accgaccacatttctccggccggtgccatcgccccggacagcccggcgggcaaatacctg
cgtgaacacggtgtggagccgaaagacttcaactcgtacggttcccgtcgtggcaacgac
cgcgtcatgacccgcggcacctttgccaacatccgtatccgcaacctgatggtcccgggt
acggaaggcggcgtcaccaagttcctgccgaccggcgaagtcatgccgatttacgacgcg
gccatgaagtacaaggagcaaaacacgccgctggtggttctggccggtaaggagtacggc
acaggaagctcccgcgactgggcggccaaaggcaccaacctgcttggtgtaaaagccgtc
atcgcggaaagctttgaacggatccaccggagcaacttggttggtatgggcgtgctgccg
ctccagttcgtcgaaggtcaaaacgccaaaacgctgaacctgaccggcgaagaaaccttc
gacatcatcggtctgagcgacgacatgcaacccaaccaaacgctgaaagtacgtgccacc
aaagcggacggaaccacggtcgaattcgacgtgatctcccgtctggacagcgtggtggac
atcgaatactaccgcaacggtggtattctgcaaacggtgttgcgtcaaatcctgaacaac
accgagcaagtgaacgcctga
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