Polycladomyces abyssicola: JIR001_05820
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Entry
JIR001_05820 CDS
T07192
Symbol
acoR
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pabs
Polycladomyces abyssicola
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pabs03000
]
JIR001_05820 (acoR)
Transcription factors [BR:
pabs03000
]
Prokaryotic type
Helix-turn-helix
Other families
JIR001_05820 (acoR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
MimR_N
Sigma54_activ_2
HTH_8
GAF
AAA_5
HTH_30
HTH_20
AAA
HTH_28
HTH_IclR
Mg_chelatase
HTH_23
HTH_1
HTH_psq
HTH_50
HTH_7
HTH_29
HTH_24
AAA_2
Phage_NinH
HTH_Tnp_1
HVO_A0261_N
HTH_17
HTH_AsnC-type
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
BCU80799
UniProt:
A0A8D5UEE9
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All DBs
Position
complement(604586..606604)
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AA seq
672 aa
AA seq
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MTQRHLALTSSYEIADKRLEMSRQWNCFLEERQIPRAVRPVVQNSWKRCMETGVDPTRQQ
TTVLLSDEDVQKRIANFRLYQLALPILERLAKQTEETGHLLTLCNHDGFILYLCGEQSIL
QRAEKMNFVVGSQWSEEAIGTNAIGTCLKTGQPVQIFASEHFCEGVHDWTCSSAPIFDPI
TQNILGVVDLTGPWNYAQPHSLGLVVAASQLIQQRLNEEADRHRYRLMERFWEAHRRYPQ
DGVVVLDLSFQMVQANTAARRWLANNYACLRQLLYQLMTDHQSNADAQKCKSFQPQTPDV
TAIEEVFDDDARIGFLCIIRNKSVVNRSEPLMRSNPSWKDLVGHSPAMVQAMTKCEVVAD
TDVPVLLLGESGTGKERFARAIHASSRRRDKPFIAINCGAIPKELIAAELFGYEPGTFTG
GLKQGKKGKFEEADGGTLFLDEIGEMPLEFQVHLLRVLQEKEILRLGGHRPAKVDVRIIA
ATHRDLVQMVREKRFRADLFYRLHVISIAIPPLRDRRDDIPLLLDHFVRRFADKYNRPIP
KIDPELKAFLVHRYDWPGNVRELENAVEHAMLFCAGDRIDSDHFPHAIGNAYLSDTQEQT
CTLLTVDSKNELTFTSDGSPSGEKERLLQILTETGGNLSEAARRLGIARTTLYRRLKKLG
IEKRAIIRAGNP
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
gtgacccaaaggcatttggcccttacgtcctcttacgaaattgccgataaacggctcgaa
atgtcccgacaatggaattgttttctcgaggagcgtcagatccctcgtgccgttcgacct
gtagtacaaaactcatggaaacgctgtatggagaccggtgtggatcccacacggcagcag
acaacggtactgttaagcgatgaggacgtacaaaaacgtatcgccaatttccgtttgtat
caactggcccttcccatattggaacggctggcaaaacagacggaagagacgggccatctc
ctaaccctgtgcaatcacgatgggttcattttgtacctgtgcggcgaacaatctatttta
cagcgggcggaaaaaatgaatttcgtcgttggttcgcagtggagcgaagaggcgattgga
accaacgcgatcgggacgtgcttgaagactggacagcccgtacaaatttttgcctctgaa
cacttttgcgagggcgtccatgactggacatgttcctccgcccccatttttgatccaatc
acccagaatatcctcggggttgtcgacctcaccggaccctggaactatgcacaaccccac
agtctcggcttggtagtggccgcgtcccaattgattcaacaacggttgaacgaggaggcc
gatcgtcaccgctatcggttaatggaacgattttgggaagcccatagacgctatccacaa
gatggcgtagtggtgttggatttgtcttttcagatggttcaggccaacacagccgctcgg
cgttggttagcgaacaactacgcctgcttgcgtcaactgctctaccagcttatgaccgat
caccaatccaacgcggatgcgcaaaaatgtaagtcgtttcaaccgcaaacacccgacgta
accgccattgaggaggttttcgacgacgacgcgcgcatcggatttctctgtatcatccgc
aacaaatctgtcgtcaaccgatcggaaccactgatgcgttccaacccttcatggaaagac
ctcgtcggtcattcgccggccatggtacaagcaatgaccaaatgcgaagtggtggctgac
accgatgttccagtgctgctcctcggcgagagcggaacgggaaaagaacggtttgcccgc
gccattcacgcatcgagccgccgccgcgataagcctttcattgcgatcaactgtggggcc
atccccaaagaactgatcgcggcggagctgtttggatacgagccaggaacatttaccgga
ggcttgaaacaaggaaaaaagggcaaatttgaggaagcggacggtggtacactctttctt
gacgaaattggggagatgcccctggaatttcaagttcacctgcttcgggttctacaagag
aaggaaattctccgcctgggcggtcaccgtcccgccaaggtcgatgtacggatcattgcc
gccactcaccgtgacttggtccaaatggtgcgggaaaaacgctttcgggctgacttgttt
taccggctgcacgtaatcagcatcgccattccgccgctgcgggaccggcgtgacgacatt
ccgcttttactcgatcactttgtcaggcgattcgcagacaagtacaaccgtcccattccc
aaaatcgatcccgagttgaaggcgtttctcgttcaccgatacgactggcccggaaacgtt
cgtgagctggaaaacgccgtcgagcatgccatgctcttctgtgctggtgaccggatcgac
tcggaccacttccctcatgccatcggaaacgcgtacctctctgacactcaggagcaaacc
tgtacactgttgacggtcgattccaaaaacgaactcacttttaccagtgacggcagccct
tccggggaaaaggagcggttattgcaaattctaacggaaacgggcggaaacctgtcggag
gcggcccgccgtctcggcattgcccgaaccacgctataccgtagacttaaaaaactaggc
attgaaaagagggccatcatccgcgctggaaacccataa
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