Polycladomyces abyssicola: JIR001_06820
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Entry
JIR001_06820 CDS
T07192
Symbol
oppC
Name
(GenBank) diguanylate cyclase
KO
K15582
oligopeptide transport system permease protein
Organism
pabs
Polycladomyces abyssicola
Pathway
pabs01501
beta-Lactam resistance
pabs02010
ABC transporters
pabs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JIR001_06820 (oppC)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JIR001_06820 (oppC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JIR001_06820 (oppC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pabs02000
]
JIR001_06820 (oppC)
Transporters [BR:
pabs02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
JIR001_06820 (oppC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
BCU80899
UniProt:
A0A8D5UD78
LinkDB
All DBs
Position
699911..700849
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AA seq
312 aa
AA seq
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MEATKQLNQDLSPEMFQPGEVSPEERNGLSSKHVGYWTDVWRRFRSNKGAIIGFTILLVV
GFLALFGQHFVPYDYQTMNYTIQNKEPFGNHYFGTDNFGRDLWARTWYGARISLTIAFLA
VLIDMTIGVTFGAISGYFGGKVDTVMQRILEVMYCIPQLIILILMMLYFEPGIVPIAIAM
GITGWVPMARIVRAQVMRLKEQEFVLAARTLGASHGRLLLKHLLPNVMGPIIVAVTFSIP
QAIFFEAFLSFIGLGINPPAASLGMLVNDGFRNLQLFPYQVFYPGLVLALIMLSFNLLGD
GLRDALDPKLRR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgaccaaacaactcaaccaggatttatccccggagatgtttcaacccggtgaa
gtgagtccggaggagagaaacgggctgtcctccaaacacgtcgggtactggaccgatgtg
tggcgccgttttcgctccaacaaaggggccatcatcggtttcaccattttgttggtggtc
ggttttctggccctgtttggacagcatttcgttccgtatgattatcagactatgaactat
accattcagaacaaggaaccgttcggcaatcactatttcgggacggacaacttcggacgc
gatctgtgggcccggacttggtacggcgcgcgcatctccttgaccatcgcctttttggcc
gtgttgatcgacatgacgatcggtgtgacgttcggcgcgatttccggatatttcggcggc
aaagtggacaccgtcatgcagcggattttggaagtgatgtactgtattccgcaactgatc
atcctcattttgatgatgctgtattttgagcccggtatcgtgccaatcgcgattgcgatg
ggaattaccggatgggtgccgatggcgcggatcgttcgcgcgcaggtgatgaggctgaag
gagcaggagttcgtattggccgcgcggacgctgggtgcgagccacgggcggttgctgttg
aagcacctgttgcccaacgtgatggggcccattatcgtggcggtcacgttctccattccg
caagcgattttctttgaggccttcctcagctttatcggtttggggatcaatcctccggcg
gccagcttggggatgttggtgaacgacggcttcagaaacctgcaattgttcccgtatcaa
gtgttttatccgggattggtcttggccctgatcatgttgagcttcaacttgttgggtgac
ggattgcgcgacgcgttggatccgaaactgcgtcgatag
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