Polycladomyces abyssicola: JIR001_06830
Help
Entry
JIR001_06830 CDS
T07192
Symbol
oppD_1
Name
(GenBank) oligopeptide transport ATP-binding protein OppD
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
pabs
Polycladomyces abyssicola
Pathway
pabs01501
beta-Lactam resistance
pabs02010
ABC transporters
pabs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JIR001_06830 (oppD_1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JIR001_06830 (oppD_1)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JIR001_06830 (oppD_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pabs02000
]
JIR001_06830 (oppD_1)
Transporters [BR:
pabs02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
JIR001_06830 (oppD_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
TniB
AAA_22
ABC_ATPase
tRNA_lig_kinase
FtsK_SpoIIIE
ATP-synt_ab
RNA_helicase
NPHP3_N
DUF87
Motif
Other DBs
NCBI-ProteinID:
BCU80900
UniProt:
A0A8D5UD47
LinkDB
All DBs
Position
700860..701882
Genome browser
AA seq
340 aa
AA seq
DB search
MEKVLEVRDLHVSFDTYNGEVKAVRGVSFDLKKGETLAIVGESGCGKSVTSQTIMRLIPN
PPGRIKQGEILFDGKDLTKLSEREMEKIRGAEIAMIFQDPMTSLNPTMTVGRQITEGLMK
HQKMSKEEAKKKAVEMLRLVGIPSPESRVNQYPHQFSGGMRQRAMIAIALSCAPKILIAD
EPTTALDVTIQAQIMELMKELQEKMNTSIILITHDLGVVADVADRVVVMYAGKVVETGTV
EEIFYRPRHPYTWGLMASMPRLDQKKEQELLPIPGSPPNLIAPPKGCPFAARCKHVMKIC
QERMPDVTNISSNHQVSCWLEHPMAPKVEPPAQLVEGGAN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggtgttggaagtacgggatctgcatgtttcgtttgacacatacaacggagaa
gtgaaagcggtacgcggcgtcagttttgacttgaaaaaaggggaaacgctggccatcgtc
ggggagtccggttgtggaaaaagcgtgacttcccaaacgatcatgcggttgattcccaat
cctcccggacggatcaaacaaggcgaaattctgtttgacggcaaggatttgaccaaactg
tccgaacgggagatggaaaaaatccgcggtgcggaaatcgcgatgattttccaagatccg
atgacgtctctcaacccgacgatgacggtgggtcggcagatcaccgaaggattgatgaag
catcaaaagatgagcaaagaggaagcaaagaaaaaggcggtcgagatgctccggctcgtg
ggcatccccagccctgaatcgcgggtgaatcaatacccgcaccagttcagtggcgggatg
cgccagcgtgccatgattgccatcgccttgtcctgtgctccgaagattctcatcgccgac
gagccgacgacggcgttggacgtgacgattcaggcgcagatcatggagctgatgaaagag
ctgcaggagaagatgaacacctccatcatcttgatcacgcatgatttgggtgtggtggcc
gacgtggcggatcgcgtcgtcgtgatgtatgcggggaaagtggtggaaaccggtacggtg
gaagagatattctaccgtccgcgtcatccgtacacctggggattgatggcttccatgccg
cggctggaccagaaaaaagagcaggaattgctccccattccgggttcgccgcccaacctg
atcgctccgccaaagggctgtccgtttgcagcccgatgcaaacatgtcatgaaaatctgc
caggaacgcatgcccgatgtgacgaatatctcatcaaaccatcaggtttcctgttggctg
gaacatccgatggcgccaaaggtagaaccaccggctcaactggtagaagggggagcgaac
tga
DBGET
integrated database retrieval system
