Polycladomyces abyssicola: JIR001_08630
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Entry
JIR001_08630 CDS
T07192
Symbol
polA
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pabs
Polycladomyces abyssicola
Pathway
pabs03030
DNA replication
pabs03410
Base excision repair
pabs03420
Nucleotide excision repair
pabs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JIR001_08630 (polA)
03410 Base excision repair
JIR001_08630 (polA)
03420 Nucleotide excision repair
JIR001_08630 (polA)
03440 Homologous recombination
JIR001_08630 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pabs03032
]
JIR001_08630 (polA)
03400 DNA repair and recombination proteins [BR:
pabs03400
]
JIR001_08630 (polA)
Enzymes [BR:
pabs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JIR001_08630 (polA)
DNA replication proteins [BR:
pabs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JIR001_08630 (polA)
DNA repair and recombination proteins [BR:
pabs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JIR001_08630 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JIR001_08630 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
BCU81080
UniProt:
A0A8D5UDF5
LinkDB
All DBs
Position
868424..871066
Genome browser
AA seq
880 aa
AA seq
DB search
MDKLVLIDGNSIAFRAFFALPLLSNSAGVYTNAVYGFTMMLMKVLEEEAPSHILVAFDAG
KTTFRHDDYQEYKGKREKTPGEFSQQIPLIKEVLDAFGIRHFELEGFEADDIIGTLARQA
ERSGLDTLIVTGDKDLLQLVTDKVHLLLTRKGVTETERYDVDAVKERYGLKPEQIIDLKG
LMGDPSDNIPGIPGVGEKTALKLLHQFGSVEEVLEHVDELPGKKLRERVAEHREQARLSK
KLATIHCNVPLTFDLEDIKFVQYDRQRVLELFKRLAFQSLIDRLGEAEETADRDDAQEIE
VQIVHESDAQLDELLTQERLACHVELSETNYHRADIIGVALSDGERHVYLPWETARQHDV
LLSWLADSSKEKIGYDVKAATVALRRHGVQVTGFSFDILLASYLLNPSESTHELSDVVRR
KLDGSLPDDESFYGKGQKRRQPDEDELARHLARKTAAMVRLHPLLVEELDDARMMSLFSE
LEMPLSRVLADMECVGVKVDRERLEKLGEELKKQLDVLTQEIYDLAGTEFNINSPKQLGE
ILFDKLGLPVLKKTKTGYSTSADVLEKLAPQHEIVEKILHFRQVGKLISTYVEGLLKEID
PETGKIHTRFNQTITATGRLSSTEPNLQNIPIRLEEGRRIRQVFVPSEPDWLILSADYSQ
IELRVLAHLSGDENLKEAFVRDMDIHTKTAMDVFGVSEEEVTPLMRRHAKAVNFGIVYGI
SDYGLSQNLNISRKEAAEFIERYFASYPGVKAYMERVVEQAKQDGYVTTMLNRRRYLPDI
RSRNYNLRSFAERTAMNTPIQGTAADIIKSAMVRMDEVLKEKGAQSRMLLQVHDELIFEV
PASELDWMKKTVREVMEGTMALSVPLKVDVHHGPTWYQAK
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggacaaactggtattaattgacggcaacagcatcgcgttccgtgcgttttttgccctg
ccgctcctatccaattcggcaggcgtctatacgaacgcggtgtacggttttacgatgatg
ttgatgaaggtgctggaagaggaagcaccttcccatatactcgtggcgttcgacgcaggc
aagacaacgtttcgccacgacgactatcaggagtacaagggaaagcgggaaaagacaccg
ggcgagttttcccagcagatcccgctgatcaaagaggtgctggatgcgttcggtatccgc
cattttgagctggaaggttttgaggccgacgacatcatcggcacattggctcgccaagct
gaacggtccggcctcgacacgttgatcgtcaccggagacaaggacttgcttcagctggtg
accgacaaggtgcatctgttgctgacgcgcaagggtgtcaccgaaacggaacggtacgat
gtcgatgcagtgaaggaacggtacggcttaaagccggaacagatcatcgatttgaaaggg
ctgatgggcgacccgtcggacaatatcccgggcatcccgggagtgggggaaaaaacggcg
ctcaaactgctccatcagttcggttccgtcgaagaagtgttggagcatgtggatgaactg
cctggcaaaaagttgcgggaacgggtggccgaacaccgggaacaagcccggctcagcaaa
aagctggccaccatccattgtaatgttcccctgacatttgacctggaggatatcaaattt
gtccagtatgaccgacagcgggtgctggaactgttcaagcggctggcctttcaatcgctc
atcgatcggttgggggaagcagaggagactgcggatcgagacgatgctcaggagattgag
gtccaaatcgtacatgaatcggatgcgcagttggacgagctgctcacacaggaacgcctc
gcttgtcacgtcgaattgagcgagacgaattatcatcgcgctgatattatcggtgtggcg
ctgtccgatggggagcggcacgtgtacctgccgtgggaaaccgcgcgtcaacacgatgtg
ctgctgtcgtggttggccgattcatcaaaggaaaagatcggatacgatgtgaaggccgcc
acggtcgcgctgcgacgtcacggggtacaagtcaccggattttcgttcgatattttgctc
gcatcctatctgctcaacccgtcggagtccactcatgagctttccgatgtggtgcgacgc
aaactggacggcagtctgccggacgacgaatcgttttacggcaaaggacaaaagcggcgc
caaccggatgaagacgagctggcccgccatctggcgcggaaaacggcggcaatggtgcgc
ctccatcccttgctggtcgaggaattggacgacgctcggatgatgtcgttgttttctgag
ctggaaatgccgctctcccgcgtactggccgacatggaatgcgttggggtgaaagtggat
cgggagcggttggaaaagctgggtgaggaactgaaaaaacaattggatgtcttgacccaa
gagatttacgatttggcgggcacagagttcaacatcaattcgccgaaacaattgggtgaa
atcctgtttgacaaattgggcctgccggtattgaaaaagaccaaaaccggttattccacc
agtgctgacgtgctggaaaaactggccccccaacacgaaatcgtggagaagattcttcat
ttccgccaggtgggcaaactgatttccacctatgtagaggggttgctgaaggagatcgac
ccggagacaggcaaaatccacacccggttcaaccagaccatcacggcgacaggtcgtctg
tccagcacagaacccaatttgcaaaacatcccgatccgcttggaagagggacgtcgcatc
cgtcaggtgttcgtgccgtccgagccggattggctgatcctgtccgccgattattctcag
atcgagctgcgtgtattggcccatctgtccggagacgaaaacctgaaggaagcgtttgta
cgggatatggacatccacaccaagacggcgatggatgtattcggcgtgtcagaggaagaa
gtgacaccgttgatgcgtcgccacgccaaagcggtcaattttgggattgtctacgggatc
agcgattacggattgtcacaaaacctaaacatctcccgcaaagaagcggcggagttcatc
gaaagatattttgcgagctatccgggtgtcaaagcgtacatggagcgcgttgtggagcag
gccaaacaggacggttacgtcaccacgatgctgaaccggcgtcgttatctgccggacatc
cgctcacgtaactacaacctgcgcagtttcgccgaacggacggcgatgaacaccccgatc
cagggaactgcggcagacatcatcaagtcggcgatggtacgcatggatgaagtgttgaag
gagaagggcgcccaaagccgcatgttgctccaggtgcatgacgagttgattttcgaagtg
ccggcatccgagttggattggatgaagaaaacagtacgggaagtgatggagggtacgatg
gcgctgtccgttccgctcaaagtggatgtccatcacggtcctacatggtatcaagcgaag
taa
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