Polycladomyces abyssicola: JIR001_09480
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Entry
JIR001_09480 CDS
T07192
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pabs
Polycladomyces abyssicola
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pabs03009
]
JIR001_09480
Enzymes [BR:
pabs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
JIR001_09480
Ribosome biogenesis [BR:
pabs03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JIR001_09480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
MucBP_2
Motif
Other DBs
NCBI-ProteinID:
BCU81165
UniProt:
A0A8D5ZM13
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All DBs
Position
952954..953700
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AA seq
248 aa
AA seq
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MAERKRQRLDKILSNMGYGTRKEIKKLIKAGYVTVNGEWADDPGMHVDPDNDVIEVDGER
VIYRRYIYLMMNKPQGVLSATEDRESAVVVDLLHPEHAFFEPFPVGRLDKDTEGLLLLTN
DGKLAHRLLSPKKHVPKTYYAEVEGAVTDADVKAFARGVTLDDGYRTLPAELKVLQSGPK
SEVELTIYEGKYHQVKRMFQAVGKRVTYLKRIAMGPLPLDPSLDPGEYRELTEEEVAALK
GAESGSPA
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacggaaacgccaacgcctggacaaaatcttgtccaacatggggtacggtacg
cgtaaggaaatcaagaaactgatcaaagcgggatatgtgaccgtcaacggtgaatgggcg
gatgatcctggcatgcatgttgatccggataatgatgtaattgaagtggatggcgaacgt
gtcatctatcgtcggtatatctatttgatgatgaacaagccgcagggggtgctgtccgcc
accgaggatcgagaaagcgcggtggtggtggatttactgcatcctgagcacgcctttttt
gagccgtttccggtaggcaggctggataaggacacggagggcctgctgttgttgaccaat
gacggcaaactggcgcaccggctgctgtctccaaaaaagcacgtaccgaagacgtattac
gcggaagtggaaggagcggtgaccgatgccgatgtcaaagcgttcgcccgtggcgtaaca
ttggacgatggttaccgcaccctgcccgccgaactgaaagtgttgcaatcgggtccgaaa
tccgaagtggaactgaccatatacgaaggcaaataccatcaggtgaaacgcatgttccag
gcggtgggaaagcgcgtcacctatttgaaacgcatcgccatgggaccgttgccgttggac
ccgagtttggatccgggagagtaccgtgagttgaccgaagaggaagtcgcggcgctgaaa
ggagcggaatccggctctccggcgtga
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