Polycladomyces abyssicola: JIR001_09560
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Entry
JIR001_09560 CDS
T07192
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pabs
Polycladomyces abyssicola
Pathway
pabs00020
Citrate cycle (TCA cycle)
pabs00190
Oxidative phosphorylation
pabs00650
Butanoate metabolism
pabs00720
Other carbon fixation pathways
pabs01100
Metabolic pathways
pabs01110
Biosynthesis of secondary metabolites
pabs01120
Microbial metabolism in diverse environments
pabs01200
Carbon metabolism
Module
pabs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pabs_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JIR001_09560 (sdhA)
00650 Butanoate metabolism
JIR001_09560 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
JIR001_09560 (sdhA)
00720 Other carbon fixation pathways
JIR001_09560 (sdhA)
Enzymes [BR:
pabs01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
JIR001_09560 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
GIDA
Pyr_redox
FAD_oxidored
NAD_binding_8
AlaDh_PNT_C
DAO
ATP-grasp_IQCH
FAD_binding_3
Trp_halogenase
Motif
Other DBs
NCBI-ProteinID:
BCU81173
UniProt:
A0A8D5UFA2
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Position
962846..964606
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AA seq
586 aa
AA seq
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MNEKIIIVGGGLAGLMAAIKTAEAGANVELFSLVPVKRSHSVCAQGGINGAVNTKGEGDS
PWEHFDDTIYGGDFLANQPPVKAMCEAAPGIIYLMDRMGVPFNRTPEGLIDFRRFGGTKH
HRTAYAGATTGQQLLYALDEQVRRWEVAGRVTKYEHWEFLKVILDDEGRCRGIVAQNLRS
HEIKAFLADAVILATGGLGMIFGKSTNSMINTGSAASAVYQQGAYYANGEFIQVHPTAIP
GDDKLRLMSESARGEGGRVWTYKDGKPWYFLEEMYPAYGNLVPRDIATRAIFKVCVDMKL
GINGENMVYLDLSHKDPKELDIKLGGIIEIYEKFMGEDPRKVPMKIFPAVHYSMGGLWVD
YNQMTNIPGLFAAGECEYQYHGANRLGANSLLSCIFGGMVAGPKAIEYVRGLEKSAEDLP
STLYESIVKDEEAKYEQLLKMDGTENAYKLHQELGQWMTDNVTVVRYNDRLLKTDEKIQE
LMERYQNINMSDTSKWSNQAVSFTRQLWNMLQLARVITLGAYHRNESRGAHYKPEFPERN
DEEWLKTTKAKFTEDGPAFEYEPVDISLIKPRPRRYDVAKEEAAKK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagaaaatcattatcgtgggtggcggattggccggtctgatggccgccatcaag
acggcggaagcgggtgccaatgtcgagttgttttcgcttgtgcccgtgaaacgttcccac
tcggtgtgtgcgcagggcgggatcaacggtgcggtcaacaccaaaggggaaggtgactcg
ccgtgggaacactttgacgacacgatctacggcggggactttttggccaaccaacccccg
gtcaaagcgatgtgtgaagcagcgccgggcatcatttacctgatggaccgtatgggagtg
ccgttcaaccgaacgccggaaggattgatcgacttccgccgattcgggggtaccaaacac
caccgtaccgcttatgccggggcgactacggggcaacaattgctctatgcattggacgag
caagttcgccgctgggaagtggccggccgggtcaccaagtacgagcattgggaatttctg
aaggtgatcttggacgatgaaggtcgttgccgcgggattgtggcgcaaaacctgcgtagt
cacgagatcaaggccttcctggccgacgctgtgatcttggcgacgggcggtttgggcatg
atcttcggcaaatcgaccaactcgatgatcaacaccggttcggcggccagtgcggtgtat
caacaaggtgcctattacgccaacggggagttcatccaagtacatccgaccgcgatccct
ggcgatgacaaattgcgcttgatgtccgagtccgcgcggggagaaggtggtcgtgtctgg
acctataaagacggcaaaccgtggtacttccttgaggaaatgtacccggcttacggtaac
ctggtaccgcgggatattgccacgcgagccatcttcaaagtctgcgtggacatgaagctc
gggatcaacggggaaaacatggtttaccttgatctgtcccacaaagatcccaaagagctg
gatatcaaattgggtggtatcatcgagatttatgagaagttcatgggtgaagacccgcgt
aaagtaccgatgaaaatcttcccggcagtgcactattcgatgggcggactgtgggtcgac
tacaatcagatgaccaacatccccgggctgtttgccgcgggcgagtgcgaatatcaatac
cacggcgccaaccgtctcggagccaactcgctactgtcgtgcatcttcggcggcatggtg
gccggacccaaagcgatcgagtatgtgcgcggattggaaaaatcggcggaagacctgccg
tccacgctgtatgaatccattgtcaaagacgaggaagccaaatacgaacagctgctcaag
atggatggcaccgaaaacgcctacaaactgcatcaggagctgggtcaatggatgaccgac
aacgtgacggtcgttcggtacaatgaccgcctgttgaaaacggacgagaaaattcaagag
ctgatggaacgctatcaaaacatcaatatgagcgacaccagcaaatggagcaaccaagcc
gtctcctttacccgccagttgtggaacatgctgcaattggcccgggtgattacgctggga
gcttaccatcgaaatgaaagccgcggtgctcactacaaacccgagttcccggaacggaac
gacgaagagtggctgaaaacgaccaaggccaaattcaccgaggacggaccggcgttcgaa
tacgaaccggttgacatctcgttgatcaaaccgcgtccgcgccggtatgacgtggcgaaa
gaggaggcggcgaagaaatga
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