Polycladomyces abyssicola: JIR001_09840
Help
Entry
JIR001_09840 CDS
T07192
Symbol
ysmB
Name
(GenBank) putative HTH-type transcriptional regulator YsmB
KO
K23775
MarR family transcriptional regulator, organic hydroperoxide resistance regulator
Organism
pabs
Polycladomyces abyssicola
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pabs03000
]
JIR001_09840 (ysmB)
Transcription factors [BR:
pabs03000
]
Prokaryotic type
Helix-turn-helix
MarR family
JIR001_09840 (ysmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MarR
Staph_reg_Sar_Rot
MarR_2
HTH_27
HTH_34
HTH_24
Fe_dep_repress
FtsK_gamma
Penicillinase_R
TrmB
DIP2311-like_C
HTH_5
GatB_Yqey
FeoC
fvmRadSAM-pep
HTH_IclR
AvrB_AvrC
KH_N4BP1_2nd
DUF5742
Motif
Other DBs
NCBI-ProteinID:
BCU81201
UniProt:
A0A8D5UEV7
LinkDB
All DBs
Position
993490..993933
Genome browser
AA seq
147 aa
AA seq
DB search
MRTHSHSPESVKKIERLLREISTIVKQKGREILTRFPITPPQFTALIYLMEEGDLTIGEL
SQKMCLACSTMTDLIDRMEKSGYVSRVRDDRDRRVVRIHMTERGETIIRDVMQARQEYLA
DILGHFSPEEVKAIGQHLELLYERMKD
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgcggactcactcacattcaccggagtcggtcaagaagatcgagcgtttgttacgggag
atcagtaccatcgtcaaacaaaagggacgcgaaatattgacgcgttttcccatcacccct
ccgcaattcaccgcattgatttatttgatggaggaaggggatttgacgatcggtgagctg
agccagaaaatgtgcttggcttgcagtactatgacggatctgattgaccgaatggagaag
agcggatacgtctcccgtgtcagagacgacagggaccggcgggtcgtccgtattcacatg
acggaacggggagaaaccatcatccgcgacgtgatgcaagctcgtcaggagtatttggcc
gatatattggggcacttttcccctgaggaggtcaaagccatcggtcagcatctggagttg
ttgtacgagcggatgaaagattag
DBGET
integrated database retrieval system
