Polycladomyces abyssicola: JIR001_10390
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Entry
JIR001_10390 CDS
T07192
Symbol
pdxS_2
Name
(GenBank) pyridoxal 5'-phosphate synthase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
pabs
Polycladomyces abyssicola
Pathway
pabs00750
Vitamin B6 metabolism
pabs01100
Metabolic pathways
pabs01240
Biosynthesis of cofactors
Module
pabs_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
JIR001_10390 (pdxS_2)
Enzymes [BR:
pabs01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
JIR001_10390 (pdxS_2)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
NMO
His_biosynth
NanE
IGPS
TetR_C_27
Motif
Other DBs
NCBI-ProteinID:
BCU81256
UniProt:
A0A8D5ZND0
LinkDB
All DBs
Position
complement(1049713..1050603)
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AA seq
296 aa
AA seq
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MSQHQTGTDRVKRGMAEMQKGGVIMDVVNAEQAKIAEAAGAVAVMALERVPADIRAAGGV
ARMADPTVIEEVMNAVSIPVMAKARIGHFVEARLLEALGVDYIDESEVLTPADDRFHIDK
TQFTVPFVCGARDLGEALRRIGEGASMIRTKGEPGTGNIVEAVRHMRMMQSQIRKVQSMS
RDELMAEAKQLGAPYELLLQVHETGRLPVVNFAAGGVATPADAALMMHLGADGVFVGSGI
FKSENPEKYARAIVEATTHYEDFELIAHLSKGLGGAMPGIEIDRLEPAARMQDRGW
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacatcaaaccggtacggaccgtgtgaaacgcggcatggccgaaatgcaaaaa
ggcggcgtcatcatggacgtcgtcaacgccgaacaagccaaaattgctgaagccgccgga
gcagtggccgtcatggcgttggagcgcgtcccggccgatattcgggccgcgggcggtgtg
gcacggatggcggacccgaccgtcatcgaagaagtgatgaacgcggtaagcattccggtc
atggccaaagcgcggatcggacacttcgttgaggcacgtctgttggaagcattgggcgtg
gactacatcgacgaaagtgaagtgctcacgccggccgacgaccgttttcacattgacaaa
acgcaatttaccgtgccgttcgtctgcggagcgcgggatttgggtgaagcgctgcgccgg
atcggggaaggtgcatcgatgatccggaccaaaggggaacccggtaccggcaatatcgtc
gaggccgtccgccatatgcggatgatgcagagccagatccgcaaggtgcaatcgatgtcc
cgcgacgaattgatggcggaagccaaacagctgggagcaccgtatgagctgttgctgcaa
gtgcacgaaaccggccgcctgccggtcgtcaacttcgcggcgggtggtgtggcgacaccg
gcggacgcggcgttgatgatgcacctgggtgccgacggcgtctttgtcggatcggggatt
ttcaaatcggagaatcctgaaaaatatgcccgtgcgatcgtggaagcgacgacgcactac
gaagattttgagctgatcgcccatctgtccaaaggattgggtggtgcgatgccgggcatc
gagatcgaccgtttggaaccggcggcccggatgcaggatcggggatggtaa
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