Polycladomyces abyssicola: JIR001_15470
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Entry
JIR001_15470 CDS
T07192
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
pabs
Polycladomyces abyssicola
Pathway
pabs03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
JIR001_15470 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pabs03011
]
JIR001_15470 (rpsA)
Ribosome [BR:
pabs03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
JIR001_15470 (rpsA)
Bacteria
JIR001_15470 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
S1_2
DUF2110
CDC48_2
S1_RRP4
DUF7357
DUF7205
EXOSC1
Motif
Other DBs
NCBI-ProteinID:
BCU81764
UniProt:
A0A8D5ZKS0
LinkDB
All DBs
Position
1546378..1547532
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AA seq
384 aa
AA seq
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MVEEMKSEMAEVTPLKRGDVVKGKVTKVEDNQALVDVGYKFDGVIPISELSSLHVDRVSD
VLQEGQEVEVKVLRVNDEEDKLILSKRAVDAERAWAELQRKFESGETLEATVADIVKGGL
VVDVGVRGFIPASLVERHFVEDFSDYKGRTLPLKVIEIDPSKNKLILSHKAVLEEEAEKK
KQATLESLQEGQVIEGTVQRITDFGAFVDIGGVDGLVHVSELAWNRVEHPSDVLTEGDKV
QVKVLKVDRDNERISLSIKETQPGPWEKVGDEIKTGDVVTGTVKRLVSFGAFVEVYPGVE
GLVHISQISRKHIATPAEVLEEGQEVRVKVLDMMPEQKRISLSIKDAEQEEARKELQNID
RNNNNGGLNVTLGDVFGDQLRRLK
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggtggaagaaatgaaatccgaaatggcagaagtgactccgttgaagcgtggagatgtg
gtcaagggcaaagtgaccaaggtggaggacaaccaggcattggtggacgtcggatacaaa
tttgacggtgtgatcccgatttcagagttgtccagcctccatgtggatcgagtgtccgac
gttttgcaggaaggacaggaagtggaggtcaaagtgctgcgcgtcaacgacgaggaagat
aaattgatcctgtccaaacgtgcggtggatgccgaacgcgcttgggcggaactgcaacgg
aaatttgaatccggtgaaacgctggaagcgaccgtggctgacatcgtcaaaggcggtctg
gtcgtagatgtcggcgttcgtggctttatcccggcctccttggtggagcgtcattttgtg
gaagatttctccgattacaaaggacgcaccttgccgctgaaagtcatcgaaatcgatcct
tccaaaaacaagctgatcctgtcccataaagcggttttggaagaggaagcagagaagaag
aaacaagccaccctcgagagcttgcaggaaggtcaagtgatcgaaggaaccgttcaacgg
attaccgacttcggcgctttcgtggatatcgggggcgtggatggtctggttcatgtgtcc
gagttggcttggaaccgggtggaacatccgtccgacgtgctgaccgaaggtgacaaagta
caggtgaaagtacttaaagtggaccgcgacaacgagcggatcagcctgagcatcaaggaa
acgcaaccgggtccgtgggaaaaagtgggggatgagatcaaaaccggcgatgtggttacc
ggtaccgtaaaacgtctggtctccttcggcgcctttgtcgaagtgtatccgggcgtggaa
ggcttggttcacatctcgcaaatttcccgtaagcatatcgctacaccggcggaagtattg
gaagaagggcaagaagtgcgcgttaaggtgctggatatgatgccggaacaaaaacggatc
agcctcagcatcaaagatgccgaacaggaagaagcgcgcaaagaattgcaaaacatcgat
cgaaacaacaataacggcggattgaatgtcacgttgggcgatgtgtttggtgaccaactc
cgccgcttgaaataa
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