KEGG   Polycladomyces abyssicola: JIR001_15470
Entry
JIR001_15470      CDS       T07192                                 
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
  KO
K02945  small subunit ribosomal protein S1
Organism
pabs  Polycladomyces abyssicola
Pathway
pabs03010  Ribosome
Brite
KEGG Orthology (KO) [BR:pabs00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    JIR001_15470 (rpsA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:pabs03011]
    JIR001_15470 (rpsA)
Ribosome [BR:pabs03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    JIR001_15470 (rpsA)
  Bacteria
    JIR001_15470 (rpsA)
SSDB
Motif
Pfam: S1 S1_RRP5 Spt6_S1 OB_RRP5_4th S1_2 DUF2110 CDC48_2 S1_RRP4 DUF7357 DUF7205 EXOSC1
Other DBs
NCBI-ProteinID: BCU81764
UniProt: A0A8D5ZKS0
LinkDB
Position
1546378..1547532
AA seq 384 aa
MVEEMKSEMAEVTPLKRGDVVKGKVTKVEDNQALVDVGYKFDGVIPISELSSLHVDRVSD
VLQEGQEVEVKVLRVNDEEDKLILSKRAVDAERAWAELQRKFESGETLEATVADIVKGGL
VVDVGVRGFIPASLVERHFVEDFSDYKGRTLPLKVIEIDPSKNKLILSHKAVLEEEAEKK
KQATLESLQEGQVIEGTVQRITDFGAFVDIGGVDGLVHVSELAWNRVEHPSDVLTEGDKV
QVKVLKVDRDNERISLSIKETQPGPWEKVGDEIKTGDVVTGTVKRLVSFGAFVEVYPGVE
GLVHISQISRKHIATPAEVLEEGQEVRVKVLDMMPEQKRISLSIKDAEQEEARKELQNID
RNNNNGGLNVTLGDVFGDQLRRLK
NT seq 1155 nt   +upstreamnt  +downstreamnt
atggtggaagaaatgaaatccgaaatggcagaagtgactccgttgaagcgtggagatgtg
gtcaagggcaaagtgaccaaggtggaggacaaccaggcattggtggacgtcggatacaaa
tttgacggtgtgatcccgatttcagagttgtccagcctccatgtggatcgagtgtccgac
gttttgcaggaaggacaggaagtggaggtcaaagtgctgcgcgtcaacgacgaggaagat
aaattgatcctgtccaaacgtgcggtggatgccgaacgcgcttgggcggaactgcaacgg
aaatttgaatccggtgaaacgctggaagcgaccgtggctgacatcgtcaaaggcggtctg
gtcgtagatgtcggcgttcgtggctttatcccggcctccttggtggagcgtcattttgtg
gaagatttctccgattacaaaggacgcaccttgccgctgaaagtcatcgaaatcgatcct
tccaaaaacaagctgatcctgtcccataaagcggttttggaagaggaagcagagaagaag
aaacaagccaccctcgagagcttgcaggaaggtcaagtgatcgaaggaaccgttcaacgg
attaccgacttcggcgctttcgtggatatcgggggcgtggatggtctggttcatgtgtcc
gagttggcttggaaccgggtggaacatccgtccgacgtgctgaccgaaggtgacaaagta
caggtgaaagtacttaaagtggaccgcgacaacgagcggatcagcctgagcatcaaggaa
acgcaaccgggtccgtgggaaaaagtgggggatgagatcaaaaccggcgatgtggttacc
ggtaccgtaaaacgtctggtctccttcggcgcctttgtcgaagtgtatccgggcgtggaa
ggcttggttcacatctcgcaaatttcccgtaagcatatcgctacaccggcggaagtattg
gaagaagggcaagaagtgcgcgttaaggtgctggatatgatgccggaacaaaaacggatc
agcctcagcatcaaagatgccgaacaggaagaagcgcgcaaagaattgcaaaacatcgat
cgaaacaacaataacggcggattgaatgtcacgttgggcgatgtgtttggtgaccaactc
cgccgcttgaaataa

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