Polycladomyces abyssicola: JIR001_17200
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Entry
JIR001_17200 CDS
T07192
Name
(GenBank) spore coat protein
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pabs
Polycladomyces abyssicola
Pathway
pabs00521
Streptomycin biosynthesis
pabs00523
Polyketide sugar unit biosynthesis
pabs00541
Biosynthesis of various nucleotide sugars
pabs01100
Metabolic pathways
pabs01110
Biosynthesis of secondary metabolites
pabs01250
Biosynthesis of nucleotide sugars
Module
pabs_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JIR001_17200
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JIR001_17200
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JIR001_17200
Enzymes [BR:
pabs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JIR001_17200
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Motif
Pfam:
dTDP_sugar_isom
Polysacc_synt_C
FdtA
Cupin_1
Motif
Other DBs
NCBI-ProteinID:
BCU81937
UniProt:
A0A8D5UHA3
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Position
complement(1700926..1701381)
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AA seq
151 aa
AA seq
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MIDGVVFQKLEKYCDDRGTFMEIVREDQHLLRRFGQMSVSMSYPGVIKAFHYHREQDDLW
YFVSGNAQVVLHDLRESSSTYRETDVYYMGEENPSVLLIPKGVAHGYRLLGIRPAVIVYL
TTHTYNRERPDEERLPWNDPDIGFDWSTRFR
NT seq
456 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacggtgtggtttttcaaaagctggaaaaatattgcgatgaccgcggcacgttt
atggagatcgtgcgggaagaccagcatttgttacgccggttcgggcaaatgtcggtgtcg
atgtcctatccgggggtgatcaaggcgtttcactaccatcgagagcaggacgacttgtgg
tatttcgtctcaggcaatgcccaggtggtgctgcatgatcttcgagaatcgtcttctacc
tatcgggagacggatgtctattacatgggagaggagaatccttccgtcctgttgatcccc
aaaggcgtggcccacggctaccgcttgctgggaatccgaccggcggtgatcgtgtatttg
acgacccatacttacaatcgggaacgaccggatgaggagcgtttaccctggaacgatcct
gacatcggatttgattggtcgacccgttttcggtag
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