Polycladomyces abyssicola: JIR001_18350
Help
Entry
JIR001_18350 CDS
T07192
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pabs
Polycladomyces abyssicola
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pabs03016
]
JIR001_18350 (truB)
Enzymes [BR:
pabs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JIR001_18350 (truB)
Transfer RNA biogenesis [BR:
pabs03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JIR001_18350 (truB)
Prokaryotic type
JIR001_18350 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BCU82052
UniProt:
A0A8D5ZNL2
LinkDB
All DBs
Position
complement(1815349..1816260)
Genome browser
AA seq
303 aa
AA seq
DB search
MTIHGIIPVRKAPGMTSHDVVARIRKLTGQRRVGHTGTLDPDVEGVLPVCLGQATRIVEY
IQELPKQYLGTMVLGRSTDTEDASGEVLEDRPVDRIDPAIVNEVFQRFHGTITQVPPMFS
AVRVKGKRLYELAREGKEVKRPSRQVTIYRLRATRIQPEGPYPEVDFDVTCSRGTYVRTL
CVDIGKALGYPAHMARLIRVKSGPFVLEDAVTLEELAEVAADGRWDEVLHPIDAVLGHLP
AVVVSGRAESGVLNGQPLECDPVDGCDWEGRLIRVYGDTHGFCGIYRLNDDGVALAEKVF
RNG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgacgattcacggtatcatccccgtgcgtaaagcccccggcatgacttcccatgatgtg
gtggcccgcatccgcaagctgacgggacaaaggcgagtcggccacaccggaacgctggac
cccgacgtggaaggtgttcttcccgtgtgtttgggacaagccacgagaattgtagaatac
attcaggaattgcccaaacagtatctcggtaccatggtgttgggccgttccaccgatacg
gaggacgcctcgggggaagtgttggaggatcgtcccgtcgatcgcatcgatcccgctatt
gtaaacgaggtgttccagcgtttccatggtacaatcacacaggtaccaccgatgttttcg
gcagtgagggtaaagggaaaacggttatatgagttggcgcgcgaagggaaagaagtcaag
cgcccgtccagacaggtgaccatttaccgtttgcgcgctacccggattcaaccggaggga
ccctatcccgaagtggactttgatgtcacctgctcccgaggcacctatgtgcggacgctg
tgtgtcgacatcggcaaagcgttgggttatcccgctcacatggcccgcttgattcgggta
aagagtggcccttttgtcttggaagatgcggtgacattggaagaattggcagaagtggcg
gcagacggaagatgggacgaagtacttcacccgatcgatgcggtactgggtcatcttccg
gctgtcgtggtgtccgggcgggccgaatccggtgtgttgaacggacagccccttgaatgc
gacccggtcgacggatgcgattgggaagggcgtctgatccgggtctacggtgacactcac
ggtttttgcggcatttaccgcttaaatgacgacggtgtcgctttggcagaaaaagtgttc
cggaatgggtga
DBGET
integrated database retrieval system
