Polycladomyces abyssicola: JIR001_19090
Help
Entry
JIR001_19090 CDS
T07192
Symbol
oppA_4
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
pabs
Polycladomyces abyssicola
Pathway
pabs01501
beta-Lactam resistance
pabs02010
ABC transporters
pabs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JIR001_19090 (oppA_4)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JIR001_19090 (oppA_4)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JIR001_19090 (oppA_4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pabs02000
]
JIR001_19090 (oppA_4)
Transporters [BR:
pabs02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
JIR001_19090 (oppA_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
BCU82126
UniProt:
A0A8D5ZP86
LinkDB
All DBs
Position
complement(1884448..1886076)
Genome browser
AA seq
542 aa
AA seq
DB search
MKKGVSLLVIFCLSLAAAGCSWVPETLNGVEAAEEGQVLNMVENTEPVNLDTAKYIDESS
AKIITNVMEGLMRLDADNRPQPAIAADFPEISPDRKTYIFHLREAYWSDGEPVTAYDFEY
AWKRALDPKTKNEYAYIFYPILNAEEYHTGKAKAESVGVQAIDEHTLKVRLKSPTPYFLS
LLSFISYMPQRKDVVEKYGDQYARDADKMVYNGPFVLSKWEHEQGYQFAKNVEYWDKDNV
RLSRVNVKIVPQSDKAIRLYMSDQVDVVPLRNKLVDVFQPSKEFVSTTSGTVNFLRFNVQ
NEFLSNRNIRKAITLVLDREELTHDVLKIGTPAYAMVPPTIHGYEGFFRELADRQQGKLV
YYDVNAAKEALQKGMAELGMDKLPVLKLLVYEDDRKIVALYVQEQLEKYLGIPVEISVEP
AKKKAKLEMNRKFDMSIFRWTADYDDPITFLDLWETKNGLNFGRWTNPRFDRIIEQSRDM
TDYQLRNKSLIEAEKLLLQDYAAAPLYYENNVFFMQKSYVKNMVHHPVGAAYSLKWVEIR
KK
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggggtatcattacttgtcattttctgcttgagtctggcggcggcgggatgc
agttgggtacccgaaacgttgaatggcgttgaagcggcggaagagggacaggtgttgaat
atggtggaaaacacggagcctgtgaatctggacaccgccaaatatatcgacgaaagttct
gccaaaatcatcaccaatgtgatggaaggattaatgcggctggatgcagacaaccgtccc
caacccgcaatagcggctgattttcccgaaatcagtcccgatcgaaagacctatatcttt
catttgagagaggcgtactggagcgacggggagccagtgacggcctatgactttgagtat
gcatggaaacgggcacttgatccaaagaccaaaaacgagtatgcctatatattctatcct
atattgaatgccgaagaatatcacacgggtaaagcgaaagccgagagtgtcggcgtacaa
gcaatagacgaacacaccttgaaggtacgtttgaagagtcccactccgtattttctcagc
ttgctgtcatttatcagttacatgccgcagaggaaagacgtggtagaaaagtatggagac
cagtatgcccgggacgcggacaaaatggtgtacaacggaccttttgtgctgtcgaaatgg
gaacatgaacaaggttatcagttcgcaaaaaatgtggagtattgggataaggacaatgtg
cggctgagccgggtcaatgtgaagatcgtcccacaatccgacaaggcgattcgtttgtat
atgtctgatcaagtggatgtggtcccgctgagaaacaaacttgtggatgtgttccaacct
tcgaaagaatttgtttcaacgaccagtggcaccgtcaattttttgaggttcaacgtgcaa
aatgagtttttgtcgaaccgaaatattcggaaggccatcacactggtacttgaccgagaa
gaactaactcatgacgtgttaaagatcggaactcctgcatatgcaatggttccaccgacc
attcacggatatgaggggttttttcgtgagcttgcggatcgtcaacagggcaaattggtt
tattatgatgtgaatgcggcgaaggaagcgctgcaaaaagggatggcggaattgggcatg
gataaactgcccgtgttgaaattgctcgtctacgaagatgacagaaaaatagtggcgttg
tatgtgcaggaacaattggaaaagtacctgggtatccccgtagaaatctcagtagaacca
gccaagaaaaaagcgaaattggaaatgaacaggaagtttgatatgagtattttccgatgg
acggcggactatgacgatcccataacattcctggatttgtgggaaacgaaaaacggcctg
aatttcggtagatggaccaatccccgtttcgaccggattatcgagcagtcgagagatatg
acggattatcaactgcgcaacaaaagcctgatcgaggctgaaaagctgttgcttcaggat
tatgctgctgcacctctgtactatgagaacaatgtcttttttatgcaaaagagttatgtg
aaaaacatggtacaccatccagtaggggcggcgtattcattgaaatgggtggaaatccgc
aagaaatag
DBGET
integrated database retrieval system
