Polycladomyces abyssicola: JIR001_19340
Help
Entry
JIR001_19340 CDS
T07192
Symbol
smc
Name
(GenBank) chromosome partition protein Smc
KO
K03529
chromosome segregation protein
Organism
pabs
Polycladomyces abyssicola
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pabs03036
]
JIR001_19340 (smc)
Chromosome and associated proteins [BR:
pabs03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
JIR001_19340 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Crescentin
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BCU82151
UniProt:
A0A8D5UEV1
LinkDB
All DBs
Position
complement(1904941..1908531)
Genome browser
AA seq
1196 aa
AA seq
DB search
MHLKRLEMMGFKSFADKTELEFVPGITAVVGPNGSGKSNVTDGIRWVLGEQSAKSLRGSK
MEDVIFAGSDTRKPVGFCEVSITFDNTDRKLNLDYSEVTVTRRVYRSGESEYLLNRQPCR
LKDITELFMDTGIGKEAYSMIGQGRIDDILSTKSEDRRAIFEEAAGIVKYKSRKKEAEKK
LDATEQNLARLNDLVLELKDQVAPLAEQAEKAAQYKEWRAQLEQTEIGLYVHKIETLHQA
WQEATKQVESFSTGQVDLAAEVSQREAKLESLRWEISRHEEEMEALQTRLLQVSEELEKV
EGRRKVLLERIRNQEAAYTQTVARIGELQSTMARLREEQSVNDERLREKETELAEAEARL
REAEARLAATGDDRALELERLRDRYRELTNEITALQSEERHLMDRRVQTERRLEELAEQE
KQLAATERSLAERMEQLRRETAEVEQMLETVADQYRRTLEEKKAGEAELAEMAKRLRQAE
QQVDALRSRHEIVKEMEAEHAGFFQGVKELLKARDRGHAALKGIHGAVAQLIQVPAEFEA
AMETALGGALQHLVVDTEEDGRKGIRFLKENGLGRATFLPMDVIQPRRFPAHEADRLRSV
DGFVGIAADLVKTDERYRSVVENLLGQVVVTRTLEKANAIARQLGYRYRVVTLDGDVVNP
GGSMTGGSRQKSKVNLLGRTRQLEELETRLREAEREWRDIRDRVDALTDRQEAWEQSLEQ
LRRQGEEHRSRKQELHASEREKAVERRSVAERLRVVREEREKTDAELVDIGRKQTELGER
LAALRQEAEKCQTTVAGLEAEVRREATEKDEVGRMITEWKVTVARLTQEKEHLKTNGARV
REELERLNEQLRSAMEQQEELDAELERNRSEAEQLEASTVDLRTVKSETQARLDEARKKR
DGWYRQREELERELREVQQTLRKQEDQLRQHEIKVNRMDVELNHLLEKLAEEYEMSFELA
RERFSVPEDPSQAEREVRSLKQKIASLGEVNLGAIEEYKRLTERLEFLEQQQNDLIEAKN
TLYEVIRNIESEMSRRFLESFEAIRTEFQDVFVKMFGGGRADLHLTDPDNLLETGIEIMA
QPPGKKLQNLGLLSGGERALTAIALLFAVIRVKPVPFCVLDEVDAALDDANVARFARYLR
EFSQNTQFIVITHRKLTMEGADVLYGITMEESGVSKLVSVKLEDFEEQVEVAAARS
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
gtgcatctcaagcggttggagatgatggggttcaagtcgttcgcggataagaccgaactg
gaattcgtccccggcatcaccgccgtggtcggtcccaacgggagcggtaaaagtaacgtg
accgacggcatccgctgggtgctgggagaacaaagcgccaaatcgctccgggggtccaag
atggaggacgtgattttcgccggcagtgacacgcgcaagccggtcggattctgcgaagtc
tccatcacgttcgacaatactgacagaaagttgaacctcgattattcggaagtgacggtt
acccgtcgtgtatatcgctcgggagaaagcgaatacctgctcaacaggcaaccctgccgt
ttgaaggatatcaccgagttgttcatggatacagggatcggcaaggaagcctactccatg
atcggtcaagggcgcatcgacgacatcttgagcaccaaatcggaagatcggcgtgccata
tttgaggaagcggccgggatcgtcaaatacaaatcacggaaaaaggaagcggaaaaaaag
ctggacgccaccgaacaaaacctggcccgactcaacgatttggttctggagctgaaggac
caggttgccccattggcggagcaggcggagaaagcggcgcagtacaaagaatggcgcgca
caattggaacaaacggaaatcggcttgtatgtacataagattgaaaccttgcaccaagct
tggcaggaagcgaccaagcaagtggagtccttttcaaccggacaggtggatctggccgcc
gaagtcagccaacgtgaggccaaactggaatctctgcgctgggagatcagccgtcatgag
gaagagatggaagcactccaaactcggttgctgcaggtgagtgaagaactggaaaaagta
gaaggacgaagaaaggtccttctggagcggattcgcaaccaggaagcggcgtacacccag
acggtcgcacgcatcggggaacttcaatcgaccatggcccgtctgcgggaggaacagtcc
gtcaacgacgagcgcttgcgggagaaagagactgaattggcggaggccgaagcccgtctg
agggaagcagaagctcgtctggcggcgaccggggacgatcgcgcattggaattggagcgg
cttcgcgaccgttaccgggaattgaccaatgagattaccgcattgcaaagcgaagagcgt
cacctgatggatcggcgagtgcaaactgaacgtcgtctcgaagagttggccgaacaagaa
aagcagctggccgcaacggagcggtcgctggctgagcggatggaacagctccgacgtgaa
acagctgaagtggaacagatgttggaaacggtggccgatcagtaccggcgcacattggag
gagaaaaaagcgggggaagccgaactggccgaaatggccaaacggctccgtcaagcggaa
cagcaagtggatgccctccgttcgcgccacgagatcgtcaaggagatggaagcggagcac
gccggtttttttcaaggcgtcaaagaacttttgaaagcccgggatcgcggccatgcggca
ctgaaggggattcatggtgcagtggcccaattgattcaggtacccgcggaatttgaggcc
gcgatggaaacggcactgggcggcgccctgcagcatttggtcgtcgacacggaagaggat
ggccgcaaggggattcgctttctgaaggaaaacggcttgggacgcgccacgttcctcccg
atggacgtcatccaaccgcgtcgtttccccgctcatgaggcggaccgcctgcgcagtgtg
gatggttttgtcggcatcgcagcagatctcgtcaaaacggatgagcgataccgctcggtc
gtggaaaatctgctgggacaagtggtggtcacccgtaccctggagaaggccaatgcgatc
gcccgtcaattgggctatcgttatcgggtggtcacattggatggcgacgtcgtaaacccg
ggcggttccatgaccggtggcagccggcaaaaatccaaggtcaacttgttaggacgcaca
cgtcaattggaggaattggaaacccgactgcgggaagcagaacgcgaatggcgcgacatc
cgggacagggtggacgcattgacggatcgtcaagaggcatgggagcaatcattggagcaa
ttgcgccgccaaggggaggaacatcggtcacgcaaacaggaactgcatgcatctgaacgg
gaaaaggcagtagaacgccggtcggtcgccgaacggttacgtgtggtacgggaagaacgg
gaaaaaacggatgcggaattggtcgatatcggccggaagcaaacagagctgggagagcgg
cttgcggcactgcggcaggaagcggaaaaatgccaaaccaccgtcgcagggttggaggcg
gaagttcgccgggaagccacggaaaaagatgaagtaggtcggatgatcactgaatggaaa
gtaaccgtggccaggttgactcaggaaaaggaacacctgaagaccaacggggcgcgtgtt
cgggaagagctggaacggttgaacgaacaactccgttctgcgatggaacagcaggaagag
ctggatgcagaattggaacgcaaccggagcgaagctgagcagctggaagcgtcaaccgtc
gatttgcgcacggtcaaatccgagacgcaagcccggttggatgaagcgcgcaaaaaacgg
gacggatggtaccgtcagcgagaggagctggagcgggagttgcgggaggtgcaacaaacc
ttgcgcaaacaggaggatcagctccggcagcatgaaatcaaggtcaaccggatggacgtg
gaattaaatcacttgttggagaaattggcggaagaatacgagatgagctttgaattggcc
cgtgaacggttctccgttccggaagatccgtcccaagcggagcgggaggtgcgatcgctc
aaacaaaaaatcgcctccttgggcgaagtgaatctcggggcgatcgaagaatacaaacgg
ctgacggaacgtctcgaatttctggagcaacagcaaaatgacctgattgaagcgaaaaac
acgctttacgaggtcatccgtaacattgagtcggagatgtcccgccggttcctggagagt
tttgaagcgatccgtaccgaattccaggacgtatttgttaaaatgtttgggggcggacgg
gcagatcttcacctgaccgacccggacaacctgctggaaaccggtatcgagatcatggca
cagcccccaggcaaaaagctgcaaaacttgggcttgctctccggcggggaacgggcgttg
accgccattgcgctgctgttcgcagtgattcgcgtgaaaccggtgccgttttgcgtgctg
gatgaggtggacgcggcgctggatgatgccaacgtggcccggtttgcccgttatctgcgg
gagttttcccaaaacacccagttcattgtcatcacccaccggaagttgacaatggaaggg
gccgatgtcctctacggtatcacgatggaggaatccggggtatccaagttggtgtccgtc
aagctggaggactttgaggagcaggtggaggtggccgctgcccgctcgtaa
DBGET
integrated database retrieval system
