Polycladomyces abyssicola: JIR001_20050
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Entry
JIR001_20050 CDS
T07192
Symbol
pyrAB
Name
(GenBank) carbamoyl-phosphate synthase pyrimidine-specific large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pabs
Polycladomyces abyssicola
Pathway
pabs00220
Arginine biosynthesis
pabs00240
Pyrimidine metabolism
pabs00250
Alanine, aspartate and glutamate metabolism
pabs01100
Metabolic pathways
pabs01110
Biosynthesis of secondary metabolites
pabs01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
JIR001_20050 (pyrAB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
JIR001_20050 (pyrAB)
00220 Arginine biosynthesis
JIR001_20050 (pyrAB)
Enzymes [BR:
pabs01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
JIR001_20050 (pyrAB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp
GARS_A
RimK
ATP-grasp_5
ATP-grasp_2
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
BCU82222
UniProt:
A0A8D5UHW9
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Position
complement(1980308..1983532)
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AA seq
1074 aa
AA seq
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MPKDPSLKKILVIGSGPIVIGQAAEFDYAGTQACRALKEEGLEVVLVNSNPATIMTDTEM
ADKVYIEPITPEFLIQVIRKERPDGLLPTLGGQTGLNMAVELAKRGVLEKEGVRLLGTEL
HAITCAEDREQFRALMKEIGEPVPESEIVHSVEEAVRFADETGYPLIVRAAYTLGGTGGG
IAHTESELREIVENGLRYSPIQQCLIEKSIAGYKEIEYEVMRDASDHSIVVCNMENFDPV
GVHTGDSIVFAPTLTLADREVQMLRSSALKIIRALDIRGGCNVQFALDPHSFQYYVIEVN
PRVSRSSALASKATGYPIAQIAAKIAIGYTLDELKNPVTGRTYACFEPALDYVVCKIPRW
PFDKFTSANRKLGTQMKATGEVMAIGRSVEESLLKAVRSLEIGMEDLELPSASELTREQL
EERLVQPDDERLFLLAEWLRRGYGLEQAAELTHIDRFFLHKIENLVRFEREVRERGSLDE
ATLRQAKRMGWTDRTLARWCGMQAEEVRQLRKEWGILPVYKMVDTCAAEFTAETPYYYST
YEQEDEVVLNGKRSVLVLGSGPIRIGQGVEFDYATVHAIKALREAGIEAVILNNNPETVS
TDFNISDRLYFEPLHIEDVLHVIEKEQPMGVIVQFGGQTALNLARHLEKAGIPILGTPLS
EIDRAEDREKCEQLLASIGVPQPPGFAVTSTEEAMEKAKEIGFPMLVRPSYVLGGRAMEI
VYSEKELTSYMSEAVKVNPEHPVLMDRYLRGKELEVDAIADGETVLIPGIMEHIERAGVH
SGDSIAIYPAQSITASQKQRLIKMTTQIARALQIRGLVNIQFVLHKDDIYVLEVNPRASR
TVPFLSKVTGIPMAQVATRVMLGESLTDQGYPSGLWPETGEVAVKVPVFSFAKLRRVDVT
LGPEMKSTGEVMGRDRDAARAIYKGLLAAGISLPQFGTVVVTISDKDKEEALPLIRRFSE
LGYRVVATHGTADMLEREGLPVTRVNKIKEGSPHIVDLIRRGEADLVVNTWTRGKTPQRD
GFRIRREAVEHGIACLTSLDTVEALLTTLESIYLTADPIGQPVTGQKKMGVLAG
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagatcccagcctgaaaaaaatcctcgtcatcggttccggtccaatcgtcatc
ggacaggcggcggagttcgactacgcaggaacgcaagcgtgccgtgcgctgaaagaggaa
ggcctggaagtggtgttggttaactccaatccggcgacgatcatgaccgacacggaaatg
gcggacaaggtgtacatcgagccgatcacacccgaattcctgatccaagtgattcgcaaa
gagcgtccggacggactgttgccgactttgggcggacagacgggattgaacatggcggtc
gaactggccaagcggggcgttttggaaaaagaaggtgttcgcctgttgggaacggaactg
cacgcgatcacgtgtgcggaagatcgggagcaattccgggcattgatgaaggagatcggc
gaaccggtgccggaaagtgaaatcgttcattcggtggaagaagcagtccgtttcgccgat
gagaccggctatccgttaattgtgcgggcggcgtatacgttgggcggtacgggaggcgga
atcgcccatacggaatcagaactgcgggaaattgtcgaaaacggattgcgctacagcccc
attcaacagtgcctgattgaaaagagtatcgccggctacaaggagatcgagtatgaagtg
atgcgtgacgcgtccgaccacagcattgtcgtctgcaacatggaaaacttcgatcccgtc
ggcgtccacaccggcgacagcatcgtgtttgcacccacacttacgctggccgaccgtgag
gtgcaaatgttgcggtcgtccgcgctcaaaatcattcgggcactggatattcgtggcggg
tgcaacgtgcagtttgccctcgatccgcacagcttccaatattacgtgatcgaagtgaac
ccgcgtgtgagccgctccagcgcactcgcttccaaagcgaccggatatccgatcgcacag
attgcggccaagatcgcaatcggctacacgttggacgagttgaaaaaccctgtcaccggg
cgaacatacgcctgtttcgaaccggcgttggactatgtggtgtgcaaaatcccacgttgg
ccgtttgacaaattcacctctgccaaccgaaaactgggcacgcagatgaaagcgacgggt
gaagtgatggccatcggccgttcggtggaggagtctctgctcaaagcggtccgttcgctt
gaaatcggcatggaagatctggagttgcctagtgcgtctgagttgacccgcgaacagttg
gaggagcgattggtccaaccggatgatgagcgattgttcctcctggccgaatggttacgc
cgcgggtatggtttagagcaagcggcggaactgacgcacatcgatcgcttcttcctgcac
aagatcgaaaacctggtccgtttcgaacgggaggtgcgtgagcgtggctcgctggatgag
gccacgttgcgacaagccaagcgaatggggtggaccgatcggacattggcccgctggtgc
gggatgcaagccgaggaagtacgccaactgcgcaaagaatggggcattttgccggtgtac
aagatggtggatacctgtgcagccgaattcacggccgagacgccgtactactactctacc
tacgagcaggaagacgaggtggtactgaacggcaaacggtcggttttggtactcggttcg
ggaccgatccgcatcgggcaaggcgttgagtttgattacgctacggtgcacgcgatcaaa
gcattgcgcgaagcggggattgaggcggttattttgaacaacaacccggaaacagtctcc
accgacttcaacatctccgaccgcctgtactttgaaccgttgcacatcgaagacgtgtta
catgtcatcgagaaagagcaaccgatgggcgtcattgtgcaattcggcggacaaacggca
ctcaacctggcgcgtcatctggaaaaagcggggattccgatcctgggtacgccgttgtcg
gagatcgaccgagccgaagatagggaaaagtgcgagcaattgcttgcgtcgatcggtgtg
ccacaaccgccaggctttgcagtcacctccacggaggaggcgatggaaaaagcgaaagaa
atcggcttccccatgttagtaaggccctcatatgtgctgggtggtcgggcgatggagatc
gtgtacagtgaaaaggaactcacttcctacatgtcggaagcggtcaaagtcaacccggaa
cacccggttctgatggatcgctacctcagagggaaagagctggaagtggacgccattgcc
gacggtgaaacggtcctgatccccggtattatggagcacattgagcgcgcgggcgttcat
tccggcgactcgatcgccatttatccggcacaatcgatcaccgcatcgcaaaaacagcgt
ctgatcaagatgacgacccagatcgcccgtgctcttcagattcgcggactggtcaacatc
cagtttgttctgcacaaagacgatatttatgtcttggaagtcaacccgcgtgcttcacgg
acggtaccgttcctgagcaaagtgacgggaattcccatggcgcaggtggccacgcgtgtc
atgttgggtgaatcgctgactgatcagggatacccgagcggattgtggccggagaccgga
gaggtggccgtcaaagtgccggtcttctccttcgccaaactgcgtcgcgtcgatgtgacg
ctggggcccgagatgaaatcgaccggtgaagtgatgggacgggatcgcgacgcggcccgc
gccatctacaagggattgctggccgccggcatttcgctgccacaattcggtaccgttgtc
gtcaccatcagcgataaggacaaggaggaggcactcccattgatccgccgtttctccgaa
ctgggataccgagtggtggcgacgcacggaacggcagacatgctggagcgggaaggttta
cccgtcacacgggtgaacaagatcaaggaaggttcaccacacatcgtcgatctcatccgt
cgaggcgaagccgatttggttgtcaacacgtggacgcgaggcaaaaccccgcaacgtgac
gggtttcggatccgtcgggaagcggtggaacacggtatcgcctgcctcacatcgctggat
acggtagaagcgctcctgaccacactggagtcgatctacttgaccgccgacccgatcggt
caaccggtgacgggtcagaagaaaatgggtgtgctggcgggttga
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