Polycladomyces abyssicola: JIR001_21860
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Entry
JIR001_21860 CDS
T07192
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
pabs
Polycladomyces abyssicola
Pathway
pabs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JIR001_21860 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pabs03021
]
JIR001_21860 (sigA)
Transcription machinery [BR:
pabs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JIR001_21860 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
HTH_20
MLD
Sp-DndD
Peptidase_S13
tify
Motif
Other DBs
NCBI-ProteinID:
BCU82403
UniProt:
A0A8D5UHV2
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Position
complement(2140806..2141927)
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AA seq
373 aa
AA seq
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MAKEQHVDTEMDLTLEQMKEQLIDLGKKRGVLSYKEIMEKLSAYDQDSQQIDEFFEQLAD
QGIEVINEDVDDDMVFDDDDTHPEEEYLDDDLSVPPGVKINDPVRMYLKEIGRVPLLSAE
EEVELAKRIEQGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKF
DYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPT
PEEIAKEMNLSPEKVREIMKIAQEPVSLETPIGEEDDSHLGDFIPDDDAQAPADAAAYEL
LKEQLKEVLDTLSEREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLR
HPSRSKRLKDFLE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaggaacaacatgttgacaccgagatggatcttactttggagcaaatgaaagaa
caactgatcgacctcggcaagaaacggggcgttctcagctataaagagattatggaaaaa
ttgtccgcctacgatcaggattcccaacaaatcgatgagtttttcgagcagttggctgat
caggggatcgaagtgatcaacgaagacgtggatgatgatatggtcttcgatgatgacgat
acgcatcctgaagaagaatatctggacgatgacctgagtgtgcctccgggtgtcaaaatc
aacgacccggttcggatgtacttgaaggagattggacgtgtaccgctgttatctgcagag
gaagaagtcgaactcgccaagcggatcgaacagggggacgaagaagccaaacggcgtctc
gccgaggccaacctccgtctggtggtcagcatcgccaaacggtatgtgggccggggcatg
ctgttcctggatctgatccaagaaggcaatatgggtctgatcaaagctgtcgagaaattc
gactatcgcaaagggtacaagttcagtacctacgccacgtggtggattcgccaagcgatc
acccgtgcgattgcggatcaggcccgcacgatccgaatcccggtgcatatggtcgagacg
atcaacaaactgatccgggtttcccgtcagctgttgcaggaattgggacgggagcccacg
ccggaggaaattgccaaggagatgaacctcagccccgaaaaggttcgcgagatcatgaaa
attgcccaagaaccggtctcgctggaaacaccgatcggggaagaagacgactctcatctg
ggagatttcatccccgacgacgacgcgcaggcgccagcggatgcggccgcctacgagttg
ttgaaggaacagctgaaggaagtgctggacaccctgtccgagcgcgaagaaaatgtgtta
cgtctccggtttgggttggacgacggacgcacccgcacactggaagaagtgggcaaggtg
ttcggcgtcacccgggagcggattcggcagatcgaagcaaaagcactccgcaaattgcgc
catcccagccgaagcaaacggctcaaagatttcctcgaataa
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