Polycladomyces abyssicola: JIR001_21940
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Entry
JIR001_21940 CDS
T07192
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pabs
Polycladomyces abyssicola
Pathway
pabs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JIR001_21940 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pabs03400
]
JIR001_21940 (recO)
DNA repair and recombination proteins [BR:
pabs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JIR001_21940 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JIR001_21940 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
TarS_linker
ArfGap
Motif
Other DBs
NCBI-ProteinID:
BCU82411
UniProt:
A0A8D5ZPI4
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Position
complement(2153114..2153869)
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AA seq
251 aa
AA seq
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MLIKTEGVVIRTRDYGESHKLVWLFTREQGKISVMARGAKKPKSRFSAVTQPFTHGEYVW
FSGGSGLPTLSQADLIHAHHLLRSDLEKTAIAAYLSELLDRLTEEKEPYPHLFSLWTSTL
SLLETETDADILRHIFELKVLETAGYRPYLNGCIRCKREELPVRFSVRHGGFLCLDCATH
DPASLPLSEASARILKLLQRAVPDRLGEVRVKEETKRQLDNALRAFIDEYVPVRLRSRAF
LDQLRSGWGRD
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcaaaacggaaggcgtggtgatccgcacccgcgattacggggaaagtcacaag
ctcgtctggctatttacacgggaacagggaaagatatcggttatggcccgcggcgccaaa
aagccaaaaagccgtttcagcgcggtaacccaaccttttacccatggcgaatatgtatgg
ttttcgggaggaagcgggttgcccaccttgtcgcaagcggatctcattcatgctcatcat
ttgcttcgctccgatctggaaaaaacggcgatcgccgcttatctgtccgaactgctggac
cgtctgacggaagaaaaagaaccgtacccgcatttgttttcattgtggacgtccaccttg
tcgttgttggaaacggaaaccgatgcggacatactccgtcatatctttgaactgaaggta
ttggagactgcaggttaccgtccctatttgaacggatgcattcgatgcaaacgggaggaa
ctccctgttcggttcagcgtacggcacggggggtttctttgtttggattgtgcgacgcat
gaccccgcctcattgccgttgtccgaagcgtctgcccgcattttgaagctgttgcaacga
gccgtgccggaccggttgggggaagtgcgggtcaaggaagagaccaagcgacaattggac
aacgcattgcgtgcgttcatcgacgaatacgttcccgttcgtttgcggtcgcgcgcattt
ctggatcagctgcgaagcggatggggccgagattga
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