Polycladomyces abyssicola: JIR001_22370
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Entry
JIR001_22370 CDS
T07192
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pabs
Polycladomyces abyssicola
Pathway
pabs03030
DNA replication
pabs03430
Mismatch repair
pabs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JIR001_22370 (holA)
03430 Mismatch repair
JIR001_22370 (holA)
03440 Homologous recombination
JIR001_22370 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pabs03032
]
JIR001_22370 (holA)
03400 DNA repair and recombination proteins [BR:
pabs03400
]
JIR001_22370 (holA)
Enzymes [BR:
pabs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JIR001_22370 (holA)
DNA replication proteins [BR:
pabs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JIR001_22370 (holA)
DNA repair and recombination proteins [BR:
pabs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JIR001_22370 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
AAA_lid_2
DNA_pol3_delta2
HTH_38
Motif
Other DBs
NCBI-ProteinID:
BCU82454
UniProt:
A0A8D5ZLF3
LinkDB
All DBs
Position
complement(2193680..2194702)
Genome browser
AA seq
340 aa
AA seq
DB search
MYRTLAREIMKGHIEPVYLFYGKEGFLIEEMVHLLRKHVLPSEDPSFHEVILDLEEIPVQ
QLVQEAETPSFFGGRRLVIGKNAWFLTAVKGKDNVEHQPEELLRYTESPLESNVVVLIVP
AEKLDTRKKTVKALEKNCCTVAFPSLEEKELPGWVAKRLKQAGAAAQPEAVRRLIQLTGN
DLRMLDQECRKLAAYAGKEEITPEMVEQLVPRTLEHDVFKLVDCVARQKTDEALSILYDL
LYQREEPIRILALLIRQYRIMLQVKVLVQQGKSERQIASALGLHPYPVKLAVRQGEAYSE
KTLRSLLLKAIETDQAVKSGKIDKVLALERFLMAQTPEPV
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgcactttggcgcgggagatcatgaaggggcatattgagccggtttatttgttc
tacggcaaagaaggttttttgatcgaagagatggtccacttgttgcgcaaacatgtcctg
ccttcggaggatccttcctttcatgaagtgatcctggacttggaggaaatcccggtgcaa
cagctggtgcaggaggcggaaaccccttcatttttcggtgggcgccggttggtaatcggt
aaaaatgcatggttcttgactgcggtcaaggggaaggacaatgtggagcaccagccggaa
gagctcctgaggtatacggaaagtcccctggaatccaatgtcgtggtgttgatcgtaccc
gctgaaaaactggacacacgaaaaaagacagtgaaagcgttggagaagaactgttgcacc
gtcgcttttccctcattggaagaaaaagagttgccaggctgggtggccaaacggttgaaa
caagcgggtgccgcagcccaaccggaagcggttcggcggttgatccagttgacggggaac
gatttgcgcatgttggatcaagaatgcaggaaactggccgcctatgcagggaaagaggag
atcacgccggagatggtggaacagctggtcccacgaacattggagcatgatgtattcaaa
ctggtggattgtgtcgcgcggcagaaaacggacgaggcactgtccattttgtacgatttg
ttgtatcagcgggaggaaccgattcgaatcctcgctttgctgattcgccagtatcgaatc
atgttgcaagtgaaagtgttggttcagcaaggaaaatcggaacgccagatcgcttctgcc
cttgggctgcacccatatccggtgaagttggctgtgcgtcaaggggaggcatactcagaa
aaaacgctgcgctccttattgttgaaagccattgaaaccgatcaggccgtcaagtcgggg
aaaatagacaaagtgttggcattggaacggtttttgatggcgcaaacaccggagccggtt
tga
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