Polycladomyces abyssicola: JIR001_22790
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Entry
JIR001_22790 CDS
T07192
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
pabs
Polycladomyces abyssicola
Pathway
pabs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JIR001_22790 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pabs01007
]
JIR001_22790 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pabs03016
]
JIR001_22790 (alaS)
Enzymes [BR:
pabs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
JIR001_22790 (alaS)
Amino acid related enzymes [BR:
pabs01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
JIR001_22790 (alaS)
Transfer RNA biogenesis [BR:
pabs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
JIR001_22790 (alaS)
Prokaryotic type
JIR001_22790 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
Fez1
Tup_N
HAP1_N
DUF4795
bZIP_1
KASH_CCD
GTP_EFTU_D2
M64_N
HALZ
ZapB
Motif
Other DBs
NCBI-ProteinID:
BCU82496
UniProt:
A0A8D5UFG1
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All DBs
Position
complement(2239241..2241871)
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AA seq
876 aa
AA seq
DB search
MKAAEIRKKFLDFFVEKGHKVEPSASLVPVDDPSLLWINSGVATLKKYFDGRLTPDNPRI
VNAQKSIRTNDIENVGYTARHHTFFEMLGNFSIGDYFKEEAILWAWEFLTDPKWMGLDPD
RLSVTIHPEDDEAYRIWREKVGIPDERIVKLESNFWDIGEGPSGPNTEIFYDRGEHLCDP
SDPECYPGGENERYLEIWNLVFSQYNHNPDGTYTPLPKKNIDTGMGLERMASVMQDVPTN
YDTDLFQPIIQATCREAGVEYGKDKETDVALKVIADHIRTVVFAVGDGVLPSNEGRGYVL
RRLLRRAVRYGRKLGVDRPFLYQLTGVVAEIMKDYYPEPLEKQAFIERVIRGEEERFLET
LSEGLHILAQVVEQVREEGTGRISGQDAFKLYDTYGFPVDLTEDFAREHGLEVDREGFER
AMEEQRERARAARQDVDSMQVQGGALAELDVESTFVGYTRLQTDTRVAALVHDDQLVDMV
GTGETCLVVLEETPFYAESGGQVADKGWIRSDSARLRVEDVQKGPRGEHLHTVRVEEGVI
RKGDRVTAEIEEEKRADIVKNHTATHLLHRALKDVLGEHVNQAGSLVAPDRLRFDFTHIG
AMTEEEIRKVERLVNEHVWANTEVETFHKPLAEAKAMGAMALFGEKYGEIVRVVRVGDYS
LELCGGTHVNRTGEIGLFKIVSESGIGSGTRRIEAVTGRHAFRYLEGQLQLLHEAAERLK
ARPSEVVERLDALQARFKELSRENESLRAKLGRMEAQQLTDQVQEVAGVPVLAARVSVSD
MDGLRQMVDDLRNRMKECVVVLGAVNGDKVQLVAAVTPSYVKAGLHAGKLIKEVAAKCGG
GGGGRPDMAQAGGKQPEKLNDALRLVPDLVRQQVEA
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcggccgaaatacggaaaaagtttctggatttcttcgtggagaaagggcacaaa
gtagagcccagcgcttcgttggtgccggtggatgatccgtcccttttgtggatcaacagc
ggcgtggccacgttgaaaaaatacttcgacggcaggttgacgccggacaacccgcgcatc
gtcaacgcgcaaaaatcgatccgtaccaacgatatcgaaaacgtcgggtacaccgctcgt
caccatacgttttttgagatgctgggcaatttctctattggggattacttcaaggaggaa
gctatcctttgggcatgggagtttttgacggatcccaaatggatggggttggaccccgat
cgtctgtcagtcaccattcacccggaagatgacgaggcttaccgaatttggcgggaaaaa
gtgggtatccccgatgagcgcatagtcaaactggaatccaacttctgggatatcggtgaa
gggccgagcggacccaatacggagattttttatgatcgcggcgagcatctgtgtgatccg
agcgatccggagtgctatccgggcggggaaaacgagcggtatctcgaaatctggaacctg
gtcttttctcagtacaaccacaacccggacggcacctacacaccgctgccgaagaaaaat
atcgataccggaatgggcctggagcggatggcctcggtgatgcaggacgtaccgaccaac
tatgacacagatctgttccagccgatcattcaggccacgtgccgggaagcaggagtggag
tacggaaaagataaggaaacggacgtggcgctcaaagtgatcgccgatcacatacgtacc
gtcgtgttcgctgtgggcgacggcgtactgccttccaacgaaggtcgcggatacgtgttg
cgccgcttgttgcgccgtgcggtgcgctatggacggaagttgggagtcgaccgcccgttc
ctgtaccaattgaccggtgtcgtcgccgagatcatgaaagattactatccagaacccttg
gagaaacaggcgtttattgagcgcgtcatccgtggggaagaggaacggtttttggaaact
ctgtcggaaggactgcacattttggcacaggtggtggaacaggtccgggaggaaggtacc
ggccgcatctccggtcaggatgctttcaagttgtatgacacgtacggtttcccggtggat
ctgaccgaagacttcgcccgggaacacgggttggaagtggatcgggaaggcttcgaacgg
gcgatggaggaacaacgcgaacgcgcccgggccgcccggcaggacgtggacagcatgcag
gtgcagggcggagcgctcgcagagttggacgtagagagcacctttgtcggctatacccgt
ttgcagacggatacgcgagtggccgcgttggtgcatgatgaccagttggtggatatggtg
ggcacaggcgaaacctgcctcgttgtgttggaagaaacgccgttctatgcagaaagcggg
ggacaggtggccgacaagggttggattcgaagtgacagcgcccgcctgcgcgtggaagac
gtgcaaaaaggtccccgcggtgaacacctgcataccgttcgcgtggaagaaggcgtcatc
cgtaaaggcgaccgtgtaacggcggaaatcgaggaagaaaaacgggcggatatcgtcaag
aaccacacggctacccacttgttgcaccgggcgttgaaagacgtgctgggtgaacacgtc
aaccaggccggatcgttggtggcacccgatcgtcttcgtttcgatttcacgcatatcggt
gccatgacggaagaagagatcaggaaagtggaacggttggtcaatgagcatgtctgggcc
aacacagaagtggaaacgttccacaaaccgctcgccgaagcgaaggcgatgggggccatg
gccctgtttggtgaaaaatacggagagatcgtacgcgttgtccgtgtgggtgactacagc
ttggagctgtgcggcggtacacacgtcaatcgtacgggtgagatcggattgttcaagatt
gtgagcgaaagcggcatcggttccggcacgcggcggatcgaagcggttaccggtcgccat
gcgttccgctacttggaggggcaactgcagctgttgcacgaagcggccgaacgtctcaaa
gcgcgtccttccgaagtagtcgaacggttggatgccttgcaagcccgattcaaggaattg
agccgtgaaaacgagtcgctccgggccaaactgggccggatggaagcccaacaattgacc
gatcaggtacaggaagttgccggggtacctgttttggccgcacgcgtttccgtttccgac
atggacggtttgcgtcaaatggttgatgatttgcggaaccggatgaaagaatgcgtggtg
gtattgggtgcggtcaatggggataaagtacaattagtggctgccgtgacaccttcctat
gtgaaagccggactgcatgccggaaagttgatcaaggaagttgctgccaaatgcggtggt
ggaggcggcggacgtcccgacatggcacaggctggcggcaagcaacccgaaaaattgaac
gatgctctccgtttggttccggatcttgtacggcaacaggtggaagcctaa
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