Polycladomyces abyssicola: JIR001_23020
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Entry
JIR001_23020 CDS
T07192
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pabs
Polycladomyces abyssicola
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pabs03400
]
JIR001_23020 (addB)
Enzymes [BR:
pabs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JIR001_23020 (addB)
DNA repair and recombination proteins [BR:
pabs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
JIR001_23020 (addB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
BCU82519
UniProt:
A0A8D5UG75
LinkDB
All DBs
Position
complement(2271660..2274899)
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AA seq
1079 aa
AA seq
DB search
MTGTVVLHPVDSAGWGMGWGNPARFFGCKRVDYLVPGTRMARELHRRYLPFLRDQRDVHF
GTFDQFVRELLQNRRRRLLSAIEQECLVQQAVSTADREEPFTYFRGWKSRPGWIKKMETW
IGEIKRSGVLPERLMALWHDRGPKERELARIYSAYQRLLAKSGAFDHEEAYYQALQALQK
GQARLPEYVVAEHFHDLSPLQEQLLIQLVTSGVPVELHLVWDGTRPRLFKETEQTTERLR
QRGFAVRQVSVEPSQEGRVPALEHMVHTAFAVRPERQAANGAVEVLSAPGVEQETRMVAG
SVKRWLFEENGSLSDVALIVPDLDTYLSPLVRALSEAGLPVAVPLTVPLRHHPVMETILT
AMAVRMGREEERVALMQSPFVPWGSEADRRLWLKAYERWDAPQSLAELESLMGRAENENE
TDQTVWLGLMSLYRWVESIPLNALWRDWLAWLESWVNELEQPSRYRRLAEDPRMLPFLAE
EMQAFTLVREIIQEWKHVDPSGFAGEALELRTLAGMLERAAIRKRVRKKPGRRGGLRILE
PNQIRWDRYRAVWVLGCAEGKWPRPIHDDWLLPDEERVRLLQEEVRLMTSDQLRHRQLLP
FFLCASSAESYLVLSYPHADESGSARLPSPFLQELLAVWKETDVIHKRRDVSHILLARLD
ACVSRKEGLARAVSLLSQNGKADSVSTRKQAMALLKNEARRQPERTWHWLERLRVERVRL
SGNDAAFAGRLRPSLWKRHGFSLQDRVWSPAELNQLMQCPFHYFADHLLEAREPAPARRE
WAALDRGQVWHRVLCRFWRGWEEVRLSPDTWENAMERLDVLVDALFDQLLTEAEALSRDP
FRLAVEKERLKQQLSAVLSHEWHWRGVGGGSGMRPAHLELSFGMTDPNLIHRGEMDPQST
KHPVPIHLPGDVTIRVRGKVDRVDVDEEGYYAVYDYKSGTVADPKRIREGAYLQLPLFLW
AVQQVLGLDPAKAVGAAFYTPGTRQNGKPPTNNRNQGLWRKEATERTGIHARVKGLMDEK
EWTNTMEAIGERLSRQLRRVEHGDFAVDPTWECPSHCPHRTICRWDVTSSPAEKGEGEE
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgacgggaacggttgttctgcatcctgttgactcggcgggatgggggatgggctggggt
aaccccgctcggtttttcggttgcaaacgggtggattacctggttcccggaacacgtatg
gctcgggaacttcaccgtcgctacctgcctttcctacgggatcaacgggatgtgcatttc
ggtacatttgaccagtttgtccgcgagttgttgcagaatcggcgcagacgtctgctttct
gccatcgagcaggaatgtctggtgcaacaagctgtcagcactgctgatcgggaagaaccg
tttacatactttcgcggatggaaatcgcgtccgggttggattaaaaagatggagacttgg
atcggggaaatcaagcgttccggcgtactgcccgaacgtctgatggcgctttggcatgat
cgcggtcccaaagaacgtgaattggcgcgaatctattcggcctatcaacggttgctcgcg
aaaagcggagcgtttgaccacgaggaggcttactaccaagcattacaggcattgcaaaag
ggacaggcacgattgccggagtatgtggttgctgaacattttcacgatctgtctcctctg
caggaacaattgctgatccaacttgtcacctctggtgtccccgttgagctgcatttggtt
tgggacgggacgcgtccccgtttgttcaaagagacggagcagaccacggaacgcttgcgg
caacgcggctttgccgtacgacaagtttcggttgaaccgtcccaggaaggtcgggtacct
gcattggaacatatggtccacacggcgtttgctgttcgtccggaacgacaagcggcgaac
ggcgcagtggaagtgttgtccgcgcctggtgtggagcaggagacccgaatggtggcaggc
agtgtcaaacgatggttgtttgaggaaaacggatcgttatcggatgtggctttaatcgta
ccggatctggatacatacttgtccccgctcgtacgggcgttgtcggaggcaggattgccc
gtagcagtgccgttgacggtaccgctgcgccatcatccggtaatggagaccatcttgacg
gcaatggccgtgcgcatgggaagggaagaggaacgtgttgccctgatgcagagcccgttt
gttccgtggggaagtgaggccgatcgacggttgtggttgaaggcatacgaacgttgggat
gcaccacagagcttggcggaattggaatcgctcatgggccgggccgagaacgaaaacgag
acggaccagacggtatggttgggcttgatgtctttgtatcgctgggtggaaagtatcccg
ttgaatgctttgtggcgggattggttggcgtggttggaatcatgggtgaatgagctggaa
cagccgtcccggtatcgcaggttggcggaagacccgcgcatgttgccgtttctggcagaa
gagatgcaggcttttaccttggtcagggaaatcattcaggaatggaaacacgtcgacccg
tctggatttgccggggaagcattggaattgcgcacgttggccggcatgctggaacgggct
gcgatacggaaacgggtgcgcaaaaaacctggtcgtcgtggcggtcttcgcatcctggag
cccaaccagatccgctgggaccgataccgggctgtgtgggtgctgggatgtgcggaagga
aagtggccccgtccgatccacgatgactggctgttgccggatgaggagcgagtacgtctc
cttcaagaagaagtgcgcttgatgacttccgatcagttgcgtcatcggcaattgctgccg
tttttcctttgtgcttcctctgccgagtcatacttggttctttcctatcctcatgctgac
gaatccggatctgcgcgcttgccgtctccgtttttgcaggaactgttggcggtgtggaaa
gagacggatgtgatccacaaacggcgggatgtatcccacatactccttgcacgtttggat
gcgtgtgtttccaggaaagaaggattggcgcgagccgtttcgctgttgtcccaaaacggt
aaagccgattctgtgtcaacaagaaagcaggcaatggcattactgaaaaacgaagcgcgc
aggcaaccggaacgaacttggcattggctggagcggctgcgggtggaacgtgtgcgtctc
tctggaaatgacgccgcatttgccggccggttacggccgtcactgtggaagagacacggt
ttttctttgcaggatcgcgtctggagtccagcagagttgaatcagctgatgcagtgcccg
ttccactattttgccgaccacttgttggaggcacgggaacctgcgcccgctcgacgggag
tgggcagcgctggatcgagggcaagtatggcatcgggtgttgtgccgcttttggcgcgga
tgggaggaagtacgcctttcgccggatacgtgggagaatgcgatggaacggttggatgtg
ctggtggacgcgttgtttgaccagttgttgaccgaggccgaagcattgtctcgcgaccct
tttcgtttggctgtggagaaggagcggctcaaacagcagctgtccgctgttttgtcacat
gaatggcattggcgcggggtgggcggcggctccggcatgcgtccggctcatctggagctg
tccttcggcatgaccgatccaaacctgatccaccgtggtgaaatggacccacaatcaacc
aaacacccagtaccgattcacctgccgggagatgtgacgatccgagtgcgtggaaaagtg
gatcgggtcgatgtggatgaagagggctattatgccgtgtatgactacaaatcgggtaca
gtcgccgatcccaagcggatcagagaaggagcgtacctgcaattgccgttgttcctctgg
gcggtgcagcaagtgttgggtctggaccccgccaaagctgtgggagcagcattttataca
ccaggcacccggcagaacggcaaaccgcccaccaacaaccgaaaccaaggattgtggcgg
aaagaagcgacggaacgcacgggcatccatgcgcgggtgaagggattgatggatgaaaag
gaatggacgaacacgatggaagcaatcggagagcggctcagccggcagcttcgtcgagtt
gaacatggggattttgcggtcgacccgacctgggagtgcccgtcacattgcccccaccgg
acaatatgccgttgggatgtcacgtcgtcaccggcagagaaaggggaaggagaggaatga
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