Polycladomyces abyssicola: JIR001_26550
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Entry
JIR001_26550 CDS
T07192
Name
(GenBank) dipeptidase PepV
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pabs
Polycladomyces abyssicola
Pathway
pabs00300
Lysine biosynthesis
pabs01100
Metabolic pathways
pabs01120
Microbial metabolism in diverse environments
pabs01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JIR001_26550
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pabs01002
]
JIR001_26550
Enzymes [BR:
pabs01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
JIR001_26550
Peptidases and inhibitors [BR:
pabs01002
]
Metallo peptidases
Family M20
JIR001_26550
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
BCU82872
UniProt:
A0A8D5UGB7
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Position
complement(2631161..2632585)
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AA seq
474 aa
AA seq
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MTIDWQKEVESRKDELLEKLNAFLSIESVLDPDTAGEGAPFGKGIHQALTYMLELGKENG
FTVKNLDGYAGHIEYGEGEEIIGVLSHVDVVPAGDGWTTPPFSPDIRDGKLYARGAIDDK
GPTMAAFFALKIVKELGLPLSKKVRLILGTDEETYWRCMDHYFKHEPMPVMGFTPDADFP
LIVAEKGFLDISLRGEVPSGEPAADGEDTWTLASFTAGQRVNMVPDLAKAKLVGEGDVFG
LKEQYQEFLLSRRIRGYAEEADDHLMLVLEGVSHHGSEPDKGLNAALELIRFLKEKVQLD
ADGQRYVDFAHRYLVDSFFGEKMGLAQSDDIVGKLTVNAGVFHYERELSHLVRINVRYPI
SGDHEAILRKIDELARPYGLRVEDVDHKAAHAVDKNHELVRTLSRVYEEQTGQKAELLAI
GGGTYARALDVGVAFGPLFPGREETAHQKDEHIVVDNLLKATAIYAQAIYELAK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgacgattgattggcagaaggaagtggaatcgcggaaagacgagttgctggaaaaactg
aacgcgtttttgtccattgaaagtgttttggacccggatactgcaggtgaaggtgccccg
ttcggtaaagggatccaccaagcgttgacctatatgttggagctagggaaagaaaacggg
tttaccgtcaaaaatttggacggttacgccggacatatcgagtacggtgagggagaagag
ataatcggcgttttgtcccatgtggatgtagtgccggcgggggacggctggaccacgccg
ccgttttcgcccgatattcgtgacggcaaattgtacgcccgcggggcgattgacgacaag
ggaccgacgatggccgcgttttttgcattgaagatcgtgaaagaattgggcctcccgctg
tccaaaaaagtgcgcctgatcctggggaccgacgaggaaacctactggcgttgcatggat
cactatttcaaacacgagccgatgccggtgatgggctttacacccgatgccgatttcccc
ttgatcgtggcggaaaaaggcttcctcgacatttccttgcgcggcgaagtaccgtccggc
gaacccgccgctgacggggaagatacatggacgctggcttcctttaccgccgggcaacgg
gtgaacatggtgcccgatctggccaaggccaaattagtgggcgaaggcgatgtgtttggc
ctgaaggagcagtatcaggagtttctgctcagccgccgcatccggggctatgccgaggaa
gcggatgaccacctgatgctggtgctggagggagtttcacaccacggttccgagccggac
aagggattgaacgccgcgctggaactgatccggttcctgaaggaaaaagtacagttggat
gcggacggtcagcgttatgtagatttcgcccatcgttatctggtggacagctttttcggt
gaaaagatgggactggctcagtctgacgatatcgtgggcaaattgacggtcaacgccggc
gtgttccactacgaacgggagctgtcacatctggtacggatcaacgtgcggtaccccatt
tccggggatcatgaagcgattttgcggaagatcgatgaactggcccggccctacgggttg
cgtgtcgaggatgtggatcacaaagcggcccatgctgtggacaaaaaccacgagctggtg
cgcacgctctcccgggtgtatgaggagcaaaccgggcaaaaagccgaattgctcgccatc
ggcggcggtacctacgcccgggcattggacgtcggcgtggcgtttggtccgctgttcccg
ggacgcgaagagacggcgcatcagaaggatgagcacatcgtggtggacaatctgttgaaa
gcgacggccatttacgcgcaggcgatttacgagttggcgaagtga
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