Polycladomyces abyssicola: JIR001_26820
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Entry
JIR001_26820 CDS
T07192
Symbol
aorR
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pabs
Polycladomyces abyssicola
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pabs03000
]
JIR001_26820 (aorR)
Transcription factors [BR:
pabs03000
]
Prokaryotic type
Helix-turn-helix
Other families
JIR001_26820 (aorR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
GAF
PAS_4
PAS
AAA_5
Mg_chelatase
AAA
HTH_28
AAA_2
PAS_9
HTH_17
HTH_29
AAA_3
HTH_7
HTH_30
HTH_23
Xre-like-HTH
HTH_50
HTH_22
HTH_psq
DUF2089
PAS_8
bpMoxR
TIP49
MCM
HTH_20
Motif
Other DBs
NCBI-ProteinID:
BCU82899
UniProt:
A0A8D5UIM1
LinkDB
All DBs
Position
complement(2665533..2667473)
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AA seq
646 aa
AA seq
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MQFSKIKEETISLIRSWDRSKSFGVDPLYVDNDLLTGGELEDRKDRLHDLFHTSSSVLDN
LYKQLKDTPFMILISDADGYILKSWGNSPFIDRARKVWLDAGANWHEKVKGTNAIGTALV
EKKPISVVGEQHYCQENHFLCCYAAPLYSPTGELLGVLDVSGDVRHHQAHTMGMVIAAAQ
ACQAHLLLESAKRELTLCIQETDTIIDGYGQPLISVDRDGMITRINQDAARILGLPSEKC
IGQHLSRWFSQKDTDEILSAKGPSFVEPKLKADSSGGEKIKKWIVRPVRDQRDRVIRTVL
SPKPLERKEQIQKVNVQEVKEQSPTRESGIICNCPKAKEVFRLASVVAPTDATILIQGET
GTGKEVIAQSIHRTSGRSGPLVVVNCAAIPESLIESELFGYEKGAFTGAKSEGHQGKFEA
ADGGTLFLDEIGELSLASQAALLRVLEEKRVTRIGSHRSKPVNVRIIAATNRTLSKEVEE
NRFRADLYYRLCEIELFLPPLRERSDLFDLAEHFLGQMAKELGVPHISLDQVAREKIAGY
SWPGNIRELRQVLRQAAYQACLLRRTSTITVQDISLPREKGLHSTIHSKSGFWNQQEEET
IKMAIQKTRGNLSEAARLLGISRTTLYRKLNQYPQVREMRKRVLKS
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcaattttcgaaaataaaagaagaaacaatatccttgatcagatcctgggatcgcagc
aagtcatttggagtggacccgctttatgtcgataacgacctgttgacaggcggagagttg
gaagatcgcaaagatcgtctccacgatttgtttcacacatcgtcgtccgtattggacaac
ctgtataagcaactgaaagataccccttttatgattctcatttccgatgcggatggttat
attctcaaatcatgggggaactctccttttattgatcgggcgcgaaaggtttggttggat
gccggggccaattggcacgaaaaagtgaagggaaccaatgccatcgggacggctctcgtt
gaaaaaaagcccatcagcgttgtcggagaacagcattactgtcaggagaaccattttttg
tgctgctatgccgctcccctctattctccaacaggggaattgttgggtgtattggatgtg
agtggagatgtccgtcatcatcaggctcacaccatgggaatggtgatcgcggctgcccaa
gcgtgccaagcccatcttctgctggaaagtgcgaagcgggaattgaccctctgtattcag
gaaacggatacgattattgatgggtacggtcaacccctcatctcggtagatcgtgacggg
atgatcactcgaatcaaccaagatgcggccaggatcttgggtctgccttctgagaagtgc
atcggtcagcacttgtcccgttggtttagccagaaggatactgatgagattctctcggca
aagggtccatcatttgttgagccaaaattgaaagcggattcatcaggcggggaaaaaatc
aaaaagtggattgtacgtcctgttcgagatcagcgggatcgggtgatacgtaccgtgtta
agtccgaagccgttggagagaaaagaacagatacaaaaagtgaatgtgcaggaagtgaag
gagcaaagccccacacgagaaagcggcatcatctgcaactgtcccaaagccaaagaggtg
ttccgcctcgcgtcggtggtggcaccaaccgatgccaccatactcattcagggggagacc
ggcacgggcaaggaagtaatcgcacagtcgattcaccggactagcggccgttccggtcct
ttggtggtcgtcaactgtgctgcaatcccggaatccctcattgaatcggagctgttcggt
tatgaaaaaggggctttcaccggggcaaagagcgaaggccaccaagggaagtttgaggcg
gcggacgggggaaccctctttctggatgagattggggaactgtccttagcctctcaagct
gctctactgcgtgtgttggaggagaaacgggtgacaagaatcggttcccatcgctccaag
ccggtgaatgtccgcatcatcgccgccaccaaccggacattgtccaaagaggtggaggaa
aaccggtttcgggcagatttgtattatcgcctttgtgaaattgagctctttttgcctcca
ctccgggagcgctcggatctttttgacttggcggagcattttctgggacagatggccaag
gaactgggagttccccacatctctctggatcaagtggctcgtgagaaaatcgccgggtac
agttggccgggcaacatccgggaactccgacaggtactccgtcaggcggcgtaccaggcg
tgccttttgcgccggacctctacgattacggtacaggatatctcactgcccagggaaaag
ggtctccattctaccatccattccaaatcggggttttggaaccaacaagaagaggaaacg
atcaaaatggcgatccaaaaaacccggggaaatctgtcggaagcagcccgcctcctcggg
atcagccgcacgaccttgtatcggaagctgaatcagtatccccaagtccgggagatgagg
aagagggttttgaaaagttaa
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