Polycladomyces abyssicola: JIR001_27260
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Entry
JIR001_27260 CDS
T07192
Symbol
ygaD
Name
(GenBank) putative multidrug export ATP-binding/permease protein YgaD
KO
K24708
ATP-binding cassette, subfamily B, putative efflux pump [EC:7.6.2.-]
Organism
pabs
Polycladomyces abyssicola
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pabs02000
]
JIR001_27260 (ygaD)
Transporters [BR:
pabs02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JIR001_27260 (ygaD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
RsgA_GTPase
AAA_22
AAA_16
AAA_29
AAA_30
SbcC_Walker_B
AAA_24
Motif
Other DBs
NCBI-ProteinID:
BCU82943
UniProt:
A0A8D5UJ03
LinkDB
All DBs
Position
complement(2708673..2710439)
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AA seq
588 aa
AA seq
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MGSIRRYLRFVRPYRKHIVWTMVVGICKFGIPLLLPLVLKYAVDDILLVQLPAEEKVRRL
LWLLAGTFLIFTFIRYPIEYYRQYFAQWTASKVLFDIRNRLFDHLQKLSLRFYHNQKVGQ
IISRVIHDVEQTKEFVVTGMMNVWLDLFTISFAAAAMAWMDPLMTVIALSVFPLYGVAVK
YFYQRLRQRTKQRSQALAELQGHLHERIQGISVIRAFHLEAHEQSQFLQRNRHFLDKALA
HTRWNAQTFAVINTITDLAPILVIGFSSYYVIHGHMSIGEMTAFYGYVGLIYSPIRRLVN
ASTTLTQALASMDRVFELMDEPYEITDRPDAVPLLQAEGRIRFENVTFRYHEHADPVLTS
VDLTIEPGQTVALVGPSGGGKSTIVSLIPRFYDVQTGSVSVDGRDVRDWTLASLRSHIGM
VLQDNILFSGSVLDNIRMGRPTASFEEVVAAAKAANAHDFIMELKDGYETEIGERGVKLS
GGQKQRIALARVFLKDPTILILDEATSALDLQSERLIQESLDRLAKDRTTIIVAHRLSTI
THADRIYYIDEGRVKESGTHEELMSLGGNYARLFAMQHLERHEKTVSR
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtattcggaggtatctccgttttgtacggccctatcggaagcacattgtgtgg
acgatggtggtcggcatatgcaaattcgggattcccttgttgctgccattggttctgaaa
tatgccgtagacgacatattattggtccagctgcccgcagaagagaaagtcagacggtta
ctttggctgttggcggggacttttctcattttcactttcattcgttatccaattgaatat
taccggcaatatttcgcccaatggacggcgagcaaggtattgtttgacatacgtaaccgg
ttgtttgatcacctgcaaaagttgtcattgcggttttatcataatcagaaagtgggacag
attatttcccgggtaattcacgatgtcgaacagacaaaagagtttgtcgtgaccgggatg
atgaatgtttggctggatttgttcaccatttcgtttgctgcagcagcgatggcgtggatg
gatccgttgatgacagtgatcgctttatctgtgtttcccttgtatggcgtggcggtcaaa
tacttttatcagcgcctgcgccagcggaccaaacagcgttcccaggcgctcgctgagctg
caagggcatttgcacgaacgcattcaggggatttccgttatccgtgcctttcacttggaa
gcgcatgaacagagccagtttttacagcgcaataggcattttctcgataaagcattggcc
catacccgttggaacgcgcaaacatttgcagtcatcaacaccatcaccgatttggctccc
attttggtcatcggattttccagctattatgtcatacacggtcatatgagtatcggggaa
atgaccgcattttacggatacgtgggattgatctactccccgatccgccggctggtcaac
gcatccaccacattgacccaagcattggcatcgatggatcgtgtgttcgagctgatggac
gaaccgtatgagattacggaccgccctgacgctgtccctctcttacaggccgaaggccgc
atccgttttgaaaacgtgacatttcgttatcatgaacatgctgatccggtgttgacctca
gttgatttgaccattgaaccggggcagaccgtcgccttggtcggtcccagcggagggggt
aaatccaccattgtttcgttgattccccgtttttatgacgttcaaacggggagtgtaagt
gtagacggcagagatgtacgagattggacgctggccagtttgcgcagtcacattggcatg
gtgttgcaggataacattttgttcagtggaagtgtgttggataatatccggatgggacga
ccgacggcttccttcgaagaggtggtggccgccgcgaaagcagccaacgcacatgatttc
atcatggaattgaaagacggatacgaaacagaaatcggggaacgaggcgtcaaactgtcc
ggtggacaaaaacaacgcattgccttggcacgtgtttttttgaaagaccccaccattctg
attttggatgaagcgacgtccgcattggatttgcagtccgaacgcctgattcaggaatcg
ctggatcggttggcgaaagatcgcacgaccattatcgtggcgcatcgtctctccactatc
acccatgccgatcgcatctactacattgatgaaggacgggtgaaggaatcgggcacgcat
gaggagttgatgtccctcggcgggaactatgcaagattgtttgccatgcagcatttggag
cgccacgagaaaacggtcagtcgttga
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