Polycladomyces abyssicola: JIR001_29910
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Entry
JIR001_29910 CDS
T07192
Symbol
hup_2
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
pabs
Polycladomyces abyssicola
Brite
KEGG Orthology (KO) [BR:
pabs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pabs03032
]
JIR001_29910 (hup_2)
03036 Chromosome and associated proteins [BR:
pabs03036
]
JIR001_29910 (hup_2)
03400 DNA repair and recombination proteins [BR:
pabs03400
]
JIR001_29910 (hup_2)
DNA replication proteins [BR:
pabs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JIR001_29910 (hup_2)
Chromosome and associated proteins [BR:
pabs03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
JIR001_29910 (hup_2)
DNA repair and recombination proteins [BR:
pabs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
JIR001_29910 (hup_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF937
HU-CCDC81_euk_1
SIS_2
Motif
Other DBs
NCBI-ProteinID:
BCU83208
UniProt:
A0A8D5ZQD2
LinkDB
All DBs
Position
complement(2988839..2989114)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKSELVDRVAAATGKTKKESAQVVEAVLSAIAEALRNGEKVSLVGFGNFEVRERAARTG
RNPQTGETIQIEASRVPAFRPGKQLKEAVNQ
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaatcggaactggtcgatcgcgtggctgcggcgacggggaaaacgaaaaaagaa
tcggctcaagtggtggaagctgtgttgagcgccatcgccgaggcgttacgtaacggtgaa
aaagtttcgttggtcggttttggcaactttgaggttcgcgagcgtgccgcccgtacgggc
cgcaacccgcaaaccggtgaaacgatccagatcgaagccagccgggtcccggcattccgt
cccggcaaacagctgaaagaggccgtcaatcaataa
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